Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04335 ATGGCTTTTTGCCCAATTTTTTGTTGCTTAAATGCTTCGGATCGAAAAGGACGTGGGAAGAAACAACCTCCATGGCGAGTGTTTTCTTTGAAGGAATTACACTCAGCTACAAATAACTTCAACTATGATAACAAGCTTGGCGAAGGGGGATTTGGAAGTGTTTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCAGTCAAAAGATTGAAAGTTTGGAGCAACAAAGCAGACATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTACGACACAAGAATCTTCTTAGTCTACGTGGCTATTGTGCTGAAGGCCAGGAACGGCTAATTGTATATGACTATATGCCGAATTTGAGCCTACTCTCTCATCTTCACGGACAGCACTCGACAGAAAGCCTCCTTGATTGGAATCGACGAATGAATATTGCAATCGGGTCTGCTGAGGGAATTGTATATCTTCACGTCCAAGCAACACCGCATATCATCCATAGGGATGTTAAAGCAAGCAACGTGTTGCTGGATTCAGATTTTCAAGCGCGTGTTGCTGATTTTGGCTTCGCCAAGTTGATCCCTGATGGAGCAACGCATGTGACCACTCGAGTTAAGGGCACCCTTGGCTATCTTGCACCAGAATATGCTATGTTAGGTAAAGCCAATGAGAGTTGTGATGTCTACAGTTTTGGAATTCTCCTTCTCGAACTTGCCAGCGGCAAAAAACCGCTCGAAAAACTAAGTTCTTCAGTGAAACGGGCGATAAATGATTGGGCACTACCATTAGCCTGTGAAAAGAAATTTAGTGAACTTGCGGATCCGAGACTTAATGGTGACTATGTGGAAGAAGAACTTAAAAGGGTTGTTTTAGTTGCTCTAATATGTGCTCAGAATCAGCCTGAGAAGAGACCTACGATGGTCGAGGTGGTAGAACTACTGAAGGGAGAGTCGAAAGAGAAGGTTTCGCAGTTGGAGAATAATGAACTGTTTAAGAACCCCCTTGCTTTGGGAAACAATAATGATGAAATATCAGCTGCTGAAGGGAGTTCTGACTTCATATCAGCGGAGAACGAATCTAAACATGAGATGGAAGAGAATGCAGAACCATGA 1104 0.433 MAFCPIFCCLNASDRKGRGKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSTESLLDWNRRMNIAIGSAEGIVYLHVQATPHIIHRDVKASNVLLDSDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPLEKLSSSVKRAINDWALPLACEKKFSELADPRLNGDYVEEELKRVVLVALICAQNQPEKRPTMVEVVELLKGESKEKVSQLENNELFKNPLALGNNNDEISAAEGSSDFISAENESKHEMEENAEP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04335 367 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Mepo6g04335 367 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
Mepo6g04335 367 MobiDBLite consensus disorder prediction 352 367 - -
Mepo6g04335 367 MobiDBLite consensus disorder prediction 332 351 - -
Mepo6g04335 367 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Mepo6g04335 367 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Mepo6g04335 367 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Mepo6g04335 367 Gene3D Phosphorylase Kinase; domain 1 11 115 - -
Mepo6g04335 367 PANTHER OS01G0253100 PROTEIN 21 318 - -
Mepo6g04335 367 ProSiteProfiles Protein kinase domain profile. 40 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04335 367 CDD STKc_IRAK 46 313 - -
Mepo6g04335 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Mepo6g04335 367 MobiDBLite consensus disorder prediction 332 367 - -
Mepo6g04335 367 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04335 367 Pfam Protein kinase domain 41 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04335 Mepo-Chr6 55361900 55365140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04335 28 314 Trihelix Transcription Factor Family AT1G70460 50.859 5.83e-94 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mepo6g04335 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04335 - - gmx:100788153 674.47