Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04331 ATGGCTGATAATGATGCAAGGAGAAGGGCCATAATTGGCGTATCCACCTTGTTATTGGTGGCTATGGTTATTGTTGTCATGGTTGATGCCATAAACAAATACAGTTTTAAGGATGATATAGAAGAGAATAAAAAGAATCATGTTGCTTTTACAATGAAAGCAGTACGAACCATTTGTCAACCGACCGATTACAAGAAGGAATGTGAGGAATCCTTAAGAGCAGAGGCAGAGGTAGAAAATGTTACAGACCCAAAAGAACTTATTAAAATAGCATTCAATGTTACCATTAAGAAAATTGGTCAAAAACTCAAGGAAACGGATATGTTGCGCGAGCTCGAGAGGGATCCTAGATCCAAAGATGCACTTGATACTTGCAAGCAACTTATGGATCTCTCAATAGATGAATTCACAAGGTCACTTGATGGAATAGGCAAGTTAAATATTCAAGATATCGACAAAATCCTCATGAATTTGAAGGTTTGGCTCAATGGTGCCGTCACATATATGGATACATGCTTAGATGGATTTGAGAATACTACACTGAAGCTGGTAAAAAGATGA 561 0.3761 MADNDARRRAIIGVSTLLLVAMVIVVMVDAINKYSFKDDIEENKKNHVAFTMKAVRTICQPTDYKKECEESLRAEAEVENVTDPKELIKIAFNVTIKKIGQKLKETDMLRELERDPRSKDALDTCKQLMDLSIDEFTRSLDGIGKLNIQDIDKILMNLKVWLNGAVTYMDTCLDGFENTTLKLVKR 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04331 186 SMART PMEI_2 50 185 IPR006501 GO:0004857
Mepo6g04331 186 FunFam Pectinesterase 51 186 - -
Mepo6g04331 186 Pfam Plant invertase/pectin methylesterase inhibitor 54 179 IPR006501 GO:0004857
Mepo6g04331 186 NCBIfam pectinesterase inhibitor domain 51 180 IPR006501 GO:0004857
Mepo6g04331 186 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 179 IPR035513 -
Mepo6g04331 186 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 186 IPR035513 -
Mepo6g04331 186 CDD PMEI-like_3 57 185 - -
Mepo6g04331 186 PANTHER PECTINESTERASE 16 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04331 Mepo-Chr6 55330643 55331203 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04331 7 179 Carbohydrate Esterase AT3G05610 41.379 1.76e-44 154