Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04327 ATGGCTGATAATGATGCAAGGAGAAGGGCCATAATTGGCGTATCCACCTTGTTATTGGTGGCTATGGTTATTGTTGTCATGGTTGATGCCATAAACAAATACAGTTTTAAGGATGATATAGAAGAGAATAAAAAGAATCATGTTGCTTTTACAATGAAAGCAGTACGAACCATTTGTCAACCGACCGATTACAAGAAGGAATGTGAGGAATCCTTAAGAGCAGAGGCAGAGGTAGAAAATGTTACAGACCCAAAAGAACTTATTAAAATAGCATTCAATGTTACCATTAAGAAAATTGGTCAAAAACTCAAGGAAACAGATATGTTGCGCGAGCTCGAGAGGGATCCTAGATCCAAAGATGCACTTGATACTTGCAAGCAACTTATGGATCTCTCAATAGATGAATTCACAAGGTCACTTGATGGAATAGGCAAGTTAAATATTCAAGATATCGACAAAATCCTCATGAATTTGAAGGTTTGGCTCAATGGTGTCGTCACATATATGGATACATGCTTAGATGGATTTGAGAATACTACAACTGAAGCTGGTAAAAAGATGAAAGAGTTATTAACATCAAGCATGCACATGAGTAGCAATGCTCTTTCCATTATTATAGATTTTGCTGACGCAATCTCTGATTGGAACGTGACCAAAATTGTTGGACGCCATCTCCTTCAATATTTACATCAAGTGATGTAA 702 0.3704 MADNDARRRAIIGVSTLLLVAMVIVVMVDAINKYSFKDDIEENKKNHVAFTMKAVRTICQPTDYKKECEESLRAEAEVENVTDPKELIKIAFNVTIKKIGQKLKETDMLRELERDPRSKDALDTCKQLMDLSIDEFTRSLDGIGKLNIQDIDKILMNLKVWLNGVVTYMDTCLDGFENTTTEAGKKMKELLTSSMHMSSNALSIIIDFADAISDWNVTKIVGRHLLQYLHQVM 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04327 233 PANTHER PECTINESTERASE 16 206 - -
Mepo6g04327 233 Pfam Plant invertase/pectin methylesterase inhibitor 54 204 IPR006501 GO:0004857
Mepo6g04327 233 NCBIfam pectinesterase inhibitor domain 51 205 IPR006501 GO:0004857
Mepo6g04327 233 SMART PMEI_2 50 204 IPR006501 GO:0004857
Mepo6g04327 233 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 208 IPR035513 -
Mepo6g04327 233 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 205 IPR035513 -
Mepo6g04327 233 FunFam Pectinesterase 51 209 - -
Mepo6g04327 233 CDD PMEI-like_3 57 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04327 Mepo-Chr6 55310507 55311208 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04327 7 226 Carbohydrate Esterase AT3G05610 37.557 3.23e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04327 K01051 - gmx:100776244 286.189