Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04326 ATGGCAGGGGGAGATGCACAGAAAGGAAGAAAAATCGCCATAATTGGCGTATCTACCTTGTTATTGGTGGCTATGGTTGTTGCTGTAACGATTGGCATCAAAGGAAACCAAAATGATTCTAAGGACGGTTTAGAAGACAACAAAAAGAACCATGTTGCTTCTACAATGAAAGCGGTACAAACTATTTGTCAACCCACCAGTTACAAGAAGGAATGTGTGGAATCCCTCACAGCGGAGGCTGAGGCTGGCAATGTCACCGACCCAAAAGAACTCATTAAAATAGCATTCAATGTTACCATCAATAGAATTGGTGAAAAACTCAAGGAAACTGATATGTTGCGCGAGATCGAGAAGGATCCTAGATCCAAGGATGCACTTGATACTTGCAAGCAGCTTATGTATCTTTCAATTGGTGAATTCACAAGGTCACTTGATGGAATAAGCGAGTTTGATCTTAAACATATCGACCAAATTCTCATGAATTTGAAGGTTTGGCTCAATGGTGCTGTCACATACATGGATACATGCTTAGATGGATTTGAAAACACTACGGGTGACGCTAGTAAACAAATGAAAGACTTGTTGACATCAAGCATACACATGAGTAGCAATGTCCTTACTATCATTTCAAATTTTGCTGACACATTCTCTGATATGAACGTATCCAAACTTTTTGGACATCGTCTCCTTCAAGATTCTAAGACTCCTTCTTGGGTTGAACATCGCATACTCCTTGATGCAATGACAAACAAATCAAAACCAAAGCCTAATGTTACCGTAGCTTTAGATGGTAGTGGTGATTTTAAGAGCATCAATGAGGCATTGAAAAAGGTTCCTGGTGAGGAGGACGAAACACCATTTGTGATCTACATTAAGGCAGGTGTTTACCGAGAGTATGTTGAAGTTTTAAAAAACATGACACATATTGTGTTTGTTGGTGATGGTGGTAAGAAGTCAATAATCACAGGCAACAAAAATTTTATGGATGGAGTTACAACCTACCACACCACCACTGTTGCTATTCAAGGAGACCACTTTACCGCCATTAACATGGGTTTTGAGAACTCAGCTGGTCCACAAAAACATCAAGCAGTGGCACTAAGAGTTCAAGGAGATAAGGCTATCTTCTACAATTGCTCAATGGATGGATATCAAGACACACTTTATGTACACGCCATGCGTCAATTCTATCGCGACTGCACTATTTCAGGTACCATCGACTTTGTCTTTGGTAATGCAGAATCAGTATTCCAAAACTGCAAATTCGTGGTCCGAAAGCCTATGTCAAACCAACAATGCATTGTGACTGCACAAGGAAGAAAAGAAAGAACGGCACCATCAGCAATAGTCATCGAAGGAGGCTCTATTGTTGCCGACCCTGAGTTCTATCCAGTCAGGTTTGACCACAAGTCCTACCTAGCCCGTCCATGGAAGAACTTCTCTAGGACTATCATCATGGATACATTCATCGATGATTTGATTGATCCCGATGGTTTTTTGCCATGGCATACAGAAGAGGGGCCTATTAATATGGACACTTGCTTCTATGCTGAATACCATAACTATGGCCCTGGTTCAGACAAATCAAAGCGTGTGAAATGGGCTGGAATCTATAACCTCAATTCAAAGGCTGCACATAGGTTCGCACCATCCAAGTTCTTTCATGGTGGTGACTGGATTAAGGACACTGGAATTCCTTACTTTCCAACTATACCTGAGCACAAGAAGCACAAAAAGACAGTGCTTAAATGGTGA 1755 0.412 MAGGDAQKGRKIAIIGVSTLLLVAMVVAVTIGIKGNQNDSKDGLEDNKKNHVASTMKAVQTICQPTSYKKECVESLTAEAEAGNVTDPKELIKIAFNVTINRIGEKLKETDMLREIEKDPRSKDALDTCKQLMYLSIGEFTRSLDGISEFDLKHIDQILMNLKVWLNGAVTYMDTCLDGFENTTGDASKQMKDLLTSSIHMSSNVLTIISNFADTFSDMNVSKLFGHRLLQDSKTPSWVEHRILLDAMTNKSKPKPNVTVALDGSGDFKSINEALKKVPGEEDETPFVIYIKAGVYREYVEVLKNMTHIVFVGDGGKKSIITGNKNFMDGVTTYHTTTVAIQGDHFTAINMGFENSAGPQKHQAVALRVQGDKAIFYNCSMDGYQDTLYVHAMRQFYRDCTISGTIDFVFGNAESVFQNCKFVVRKPMSNQQCIVTAQGRKERTAPSAIVIEGGSIVADPEFYPVRFDHKSYLARPWKNFSRTIIMDTFIDDLIDPDGFLPWHTEEGPINMDTCFYAEYHNYGPGSDKSKRVKWAGIYNLNSKAAHRFAPSKFFHGGDWIKDTGIPYFPTIPEHKKHKKTVLKW 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04326 584 SUPERFAMILY Pectin lyase-like 254 569 IPR011050 -
Mepo6g04326 584 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 212 IPR035513 -
Mepo6g04326 584 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 212 IPR035513 -
Mepo6g04326 584 Gene3D - 251 571 IPR012334 -
Mepo6g04326 584 PANTHER PECTINESTERASE 17 561 - -
Mepo6g04326 584 CDD PMEI-like_3 61 213 - -
Mepo6g04326 584 Pfam Plant invertase/pectin methylesterase inhibitor 58 208 IPR006501 GO:0004857
Mepo6g04326 584 FunFam Pectinesterase 251 571 - -
Mepo6g04326 584 Pfam Pectinesterase 257 556 IPR000070 GO:0030599|GO:0042545
Mepo6g04326 584 ProSitePatterns Pectinesterase signature 2. 402 411 IPR033131 -
Mepo6g04326 584 NCBIfam pectinesterase inhibitor domain 54 211 IPR006501 GO:0004857
Mepo6g04326 584 FunFam Pectinesterase 55 213 - -
Mepo6g04326 584 SMART PMEI_2 54 208 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04326 Mepo-Chr6 55306499 55308764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04326 5 567 Carbohydrate Esterase AT3G05610 46.726 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04326 K01051 - gmx:100815272 892.493