Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04325 ATGGCTGATAATGATGCAAGGAGAAGGGCCATAATTGGCGTATCCACCTTGTTATTGGTGGCTATGGTTATTGTTGTCATGGTTGATGCCATAAACAAATACAGTTTTAAGGATGATATAGAAGAGAATAAAAAGAATCATGTTGCATTTACAATGAAAGCAGTACGAACCATTTGTCAACCGACCGATTACAAGAAGGAATGTGAGGAATCCTTAAGAGCAGAGGCAGAGGTAGAAAATGTTACAGACCCAAAAGAACTTATTAAAATAGCATTCAATGTTACCATTAAGAAAATTGGTCAAAAACTCAAGGAAACGGATATGTTGCGCGAGCTCGAGAGGGATCCTAGATCCAAAGATGCACTTGATACTTGCAAGCAACTTATGGATCTCTCAATAGATGAATTCACAAGGTCACTTGATGGAATAGGCAAGTTAAATATTCAAGATATCGACAAAATCCTCATGAATTTGAAGGTTTGGCTCAATGGTGCCGTCACATATATGGATACATGCTTAGATGGATTTGAGAATACTACAACTGAAGCTGGTAAAAAGACGAAAGAGTTATTAACATCAAGCATGCACATGAGTAGCAATGCTCTTTCCATTATTACAGATTTTGCTGACGAAATCTCTGATTGGAACGTGACCAAAATTGTTGGACGCCATCTCCTTCAATATTTACATCAAGTGATGTAA 702 0.3746 MADNDARRRAIIGVSTLLLVAMVIVVMVDAINKYSFKDDIEENKKNHVAFTMKAVRTICQPTDYKKECEESLRAEAEVENVTDPKELIKIAFNVTIKKIGQKLKETDMLRELERDPRSKDALDTCKQLMDLSIDEFTRSLDGIGKLNIQDIDKILMNLKVWLNGAVTYMDTCLDGFENTTTEAGKKTKELLTSSMHMSSNALSIITDFADEISDWNVTKIVGRHLLQYLHQVM 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04325 233 CDD PMEI-like_3 57 209 - -
Mepo6g04325 233 SMART PMEI_2 50 204 IPR006501 GO:0004857
Mepo6g04325 233 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 208 IPR035513 -
Mepo6g04325 233 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 208 IPR035513 -
Mepo6g04325 233 FunFam Pectinesterase 51 209 - -
Mepo6g04325 233 PANTHER PECTINESTERASE 16 215 - -
Mepo6g04325 233 Pfam Plant invertase/pectin methylesterase inhibitor 54 204 IPR006501 GO:0004857
Mepo6g04325 233 NCBIfam pectinesterase inhibitor domain 51 206 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04325 Mepo-Chr6 55305405 55306106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04325 7 226 Carbohydrate Esterase AT3G05610 37.557 3.84e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04325 K01051 - gmx:100776244 293.123