Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04324 ATGGCAGGGGGAGATGCACAGAAAGGAAGAAAAATCGCCATAATTGGCGTATCTACCCTGTTATTGGTGGCTATGGTTGTTGCTGTAACGATTGGCATCAAAGGAAACCAAAATGATTCTAAGGACGGTTTAGAAGACAACAAAAAGAACCATGTTGCTTCTTCAATGAAAGCGGTACAAACTATTTGTCAACCCACCAGTTACAAGAAGGAATGTGTGGAATCCCTCACAGCGGAGGCTGAGGCTGGCAATGTGACCGACCCAAAAGAACTCATTAAAATAGCATTCAATGTTACCATCAATAGAATTGGTGAAAAACTCAAGGATACTGATATGTTGCGCGAGATCGAGAAGGATCCTAGATCCAAGGATGCACTTGATACTTGCAAGCAGCTTATGTATCTTTCAATTGGTGAATTCACAAGGTCACTTGATGGAATAAGCGAGTTTGATCTTAAACATATCGACCAAATTCTCATGAATTTGAAGGTTTGGCTCAATGGTGCTGTCACATACATGGATACATGCTTAGATGGATTTGAAAACACTACGGGGTGGATCGACGTTCATGCACAATTCAACGACGGAGAACCTCAGAGGTTGAAGGTTCGGTGCCTTGGTGTAACATTAAGAGGTCTTAAGGATCAACTTAATGAATTCAACCAAGGAGTCAACCCCAGAGACACAAGGAGAGTGAAATACGTTCAGTATAAACGTCCAACGCTCGACGAGGGAAGAGTATCGTTCACTTGGGTGGAATTAACGAACGACGAAAACGTGAAGAGTATGTTTTGGGAGCACAGCATGTTCCAGTGGATCGATATGCGGGTAACGTTGCTGAGATCAACTGAAGATATAATCAACAGTCTGATTCCGCCAGAAGATCGTGATTAG 894 0.4273 MAGGDAQKGRKIAIIGVSTLLLVAMVVAVTIGIKGNQNDSKDGLEDNKKNHVASSMKAVQTICQPTSYKKECVESLTAEAEAGNVTDPKELIKIAFNVTINRIGEKLKDTDMLREIEKDPRSKDALDTCKQLMYLSIGEFTRSLDGISEFDLKHIDQILMNLKVWLNGAVTYMDTCLDGFENTTGWIDVHAQFNDGEPQRLKVRCLGVTLRGLKDQLNEFNQGVNPRDTRRVKYVQYKRPTLDEGRVSFTWVELTNDENVKSMFWEHSMFQWIDMRVTLLRSTEDIINSLIPPEDRD 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04324 297 PANTHER - 184 294 - -
Mepo6g04324 297 Pfam Plant invertase/pectin methylesterase inhibitor 58 183 IPR006501 GO:0004857
Mepo6g04324 297 CDD PMEI-like_3 61 190 - -
Mepo6g04324 297 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 185 IPR035513 -
Mepo6g04324 297 NCBIfam pectinesterase inhibitor domain 55 185 IPR006501 GO:0004857
Mepo6g04324 297 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 195 IPR035513 -
Mepo6g04324 297 SMART PMEI_2 54 208 IPR006501 GO:0004857
Mepo6g04324 297 FunFam Pectinesterase 55 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04324 Mepo-Chr6 55301737 55303665 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04324 5 185 Carbohydrate Esterase AT3G05610 38.122 2.00e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04324 K01051 - gmx:100820023 261.922