Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04313 ATGGTACATTCAAAGAAGTTCAGAGGTGTCAGGCAACGCCATTGGGGCTCTTGGGTCTCTGAGATTCGTCATCCATTATTGAAAAGGAGGGTGTGGTTAGGAACATTTGAAACAGCTGAAGAAGCAGCTAAAGCATATGATGAAGCAGCAATTTTGATGAGTGGAAGAAATGCGAAAACTAACTTTCCAATTAGTGTGGAAAATCAAACGAATTCTATTTCATCTTCTTCAACCTCTTCCAAATCATTTTCTGCAGTTCTTAGTGCAAAGTTAAGGAAGTGCTGCAAGTTTCCTTCACCTTCACTCACTTGCTTGAGGCTTGATGCAGAGAATTCACACATTGGAGTGTGGCAGAAAGGTGCAGGTCCTCGTTCTGAATCAAATTGGATTATGATGGTTGAGTTAGAAAGGAAAAAAAATGCTTCTGTGCCAGAGAAGGCAAAGCCAGATGAATCAAGTAAAAATGGTTTGGATGATGAACAGAAAATTGCTTTGCAGATGATAGAAGAACTTCTCAATAGAAACTAA 528 0.3958 MVHSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAAKAYDEAAILMSGRNAKTNFPISVENQTNSISSSSTSSKSFSAVLSAKLRKCCKFPSPSLTCLRLDAENSHIGVWQKGAGPRSESNWIMMVELERKKNASVPEKAKPDESSKNGLDDEQKIALQMIEELLNRN 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04313 175 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Mepo6g04313 175 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Mepo6g04313 175 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Mepo6g04313 175 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 138 - -
Mepo6g04313 175 Gene3D AP2/ERF domain 5 66 IPR036955 GO:0003700|GO:0006355
Mepo6g04313 175 MobiDBLite consensus disorder prediction 139 158 - -
Mepo6g04313 175 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Mepo6g04313 175 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Mepo6g04313 175 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Mepo6g04313 175 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Mepo6g04313 175 MobiDBLite consensus disorder prediction 139 160 - -
Mepo6g04313 175 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04313 Mepo-Chr6 55175689 55176965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04313 1 175 AP2-EREBP Transcription Factor Family AT1G15360 61.000 5.14e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo6g04313 AP2 1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04313 - - gmx:100796962 254.603