LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g04252	ATGAAGAAAGATAAGAGTGTCAGTTCGAAAGCTGGAGAGGTCCCGGTTAGATTAACTCGCGCACGAGCTGCTGCTTTAAGTGCAACAGGAGAGTTACCACCATTGAACGATGTAGCACAAGAAAGTCAGAAGCATCCGCAGGACGCCAATTCAGAAAGAGCAGTCTCTGATGATACATGCCTTCCCCGTAAGAAGAGGGTAGCTCTTGAGGATGTCACTAACATTTATCAGGCTAAGAAAACAAAGCTGACCAAGCCGGATCAACTCAATGTTTCAACTGAGGTTCCATCCGTTTCTTTGGAAGACAATGCACCTTCAAATCTGACTGGTGGCCAGACATCTGAACCATCTGCTCAGCCTTTCAATTCTCAAGCTAAAGCAGCTTCACAAACTGATGCAGCCAAGAAAGATAGTGATTCCGAACTTCTGAATGCGCCCAAGGCTCCGGATATTCCTAATATAGATGCTGATATTGAAGATCCTCAACTATGCAGCTTCTATGCCGCGGATATATATGACAACTTGCGTATTGCTGAGCTGTCAAGAAGGCCTCATCCTAACTTCATGGAAACGGTACAGCGAGATATAACTCCAGCCATGCGTGCGATACTGATTGATTGGCTTGTAGAGGTTTCTGAGCAATTCAATTTGCAAGCAAACACTCTCTACCTCACTGTATATCTCATAGATTGGTTTCTCTCCAAAAATTCCATTGAAAGACAGAGACTTCAACTGCTAGGCATCACTTGCATGCTAATTGCCTCGAAGTACGAAGAAATTAATGCCAACAATATTGAAGATTTCTGCGTCATGACGGACAACACATACACAAGAGAGGAGGTACTAAATATGGAGATTCAAGTGTTGAAGTCATCTGCATATCAACTGTTCGCTCCCACAACAAAACATTTTCTCAGGAGGTTTCTTCGAGCAGCACAAGCTTCATACCAGACACCTAGCGTCGAGTTGGAGTACTTGGCAAATTATCTGGCTGAATTAACACTGATGAACTATGGTTTCTTAAATTTCTTTCCTTCTATGATTGCTGCATCTGCTGTGTTTCTCGCAAGATGGACATTGGATCAGTCAAGGCACCCATGGAATCCAACTCTTGAACACTATGCCTCTTACAAAGCATCAGATTTGAAAGCCACAGTTCTTGCATTACAAAATATACAGCTGAATAGCGATGATTGCCGTTTACCTGCGATCCGTACAAAATACCGACAAGGCAAGTTTAATGCTGTAGCAGTTTTGTCTTCACCAAAACTACCTGAAACAATGTTTTGA	1290	0.4287	MKKDKSVSSKAGEVPVRLTRARAAALSATGELPPLNDVAQESQKHPQDANSERAVSDDTCLPRKKRVALEDVTNIYQAKKTKLTKPDQLNVSTEVPSVSLEDNAPSNLTGGQTSEPSAQPFNSQAKAASQTDAAKKDSDSELLNAPKAPDIPNIDADIEDPQLCSFYAADIYDNLRIAELSRRPHPNFMETVQRDITPAMRAILIDWLVEVSEQFNLQANTLYLTVYLIDWFLSKNSIERQRLQLLGITCMLIASKYEEINANNIEDFCVMTDNTYTREEVLNMEIQVLKSSAYQLFAPTTKHFLRRFLRAAQASYQTPSVELEYLANYLAELTLMNYGFLNFFPSMIAASAVFLARWTLDQSRHPWNPTLEHYASYKASDLKATVLALQNIQLNSDDCRLPAIRTKYRQGKFNAVAVLSSPKLPETMF	429

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g04252	429	SUPERFAMILY	Cyclin-like	159	291	IPR036915	-
	Mepo6g04252	429	SMART	cyclin_7	303	391	IPR013763	-
	Mepo6g04252	429	SMART	cyclin_7	206	290	IPR013763	-
	Mepo6g04252	429	FunFam	Mitotic cyclin 6	184	284	-	-
	Mepo6g04252	429	MobiDBLite	consensus disorder prediction	25	66	-	-
	Mepo6g04252	429	Pfam	Cyclin, N-terminal domain	170	291	IPR006671	-
	Mepo6g04252	429	Gene3D	-	170	418	-	-
	Mepo6g04252	429	Gene3D	-	184	297	-	-
	Mepo6g04252	429	Pfam	Cyclin, C-terminal domain	299	421	IPR004367	-
	Mepo6g04252	429	MobiDBLite	consensus disorder prediction	95	154	-	-
	Mepo6g04252	429	MobiDBLite	consensus disorder prediction	95	131	-	-
	Mepo6g04252	429	FunFam	Cyclin A1	285	418	-	-
	Mepo6g04252	429	SMART	Cyclin_C_2	299	422	IPR004367	-
	Mepo6g04252	429	SUPERFAMILY	Cyclin-like	299	423	IPR036915	-
	Mepo6g04252	429	CDD	CYCLIN_AtCycA-like_rpt2	299	413	-	-
	Mepo6g04252	429	PANTHER	CYCLINS	124	386	IPR039361	-
	Mepo6g04252	429	PIRSF	Cyclin_A_B_D_E	2	428	IPR046965	GO:0016538\|GO:0044772
	Mepo6g04252	429	MobiDBLite	consensus disorder prediction	46	66	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g04252	Mepo-Chr6	54615842	54619556	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo6g04252	1	429	Core Cell Cycle Gene Families	AT1G80370	49.677	9.72e-147	424

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g04252	K06627		-	mtr:11430006	776.548