Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04251 ATGAGGAATAATGTAACTTTGAAAGCTGGAGAGGTTCCAAGTCGATTGACTCGTGCTCGAGCTGTGGCTTTAAGTACAACTGGACAGTTACCACCATTGAAGGAGGTAGCACCAGGAACTCAGGATCAGAAGCATCCCCTAAGAGCCAATTCAAAAAGAGCAGTTTCAGATGTTACATATCTTCCTCATAAAAAGAGGGCAATTCTTCAAGATGTTACTAACAATTGTGGCGAAAATACAAAAAGGAGTTGCTTAAATCCAACTGAAATTCAGGCTAAGAAAAGGAAGGTGGCTAAGCCTGCTCAACCTGACATTTCAAATGAGGTTCCATCAGCTGCTGAGCTACCACCGTTCATAGCTGACTCAAAACCGGTGAGTTCAATGGAAATGCGGCTTAGATCATCCGAAGATGTCAGGTGCTTATATGATTTGGAAGACAATGCACCTCTTAGGATTAGTGCCAACCAGTGTGGCACAGACAATGATCTGCTTCAGAGCCAGACGTCTAGAATATCTGCTTGGCCTTCGAGTTCTCGAAAGAAAGCTTCACAAATTGTTGCAGCCAAGAAATGCAACATTTCTGAACTTTTGAATGTATCAAAGCTTCCAGATGTCGCTGACATAGACACTGATTTTGAAGATCCTCAACTATGCAGCCACTATGCTGCTGATGTATATGACCACTTGCGTGTTGCTGAGCTGTCAAGAAGGCCTTATCCTAACTTCATGGAAACAGTACAGCAAGATATCACTCCAAGCATGCGTGCGATACTGGTTGATTGGCTTGTTGAGGTTTCTGAGGGATACAAATTGCAAGCAAACACTCTTTACCTCGCTGTATATCTCATTGATTGGTTTCTCTCCAAAAATTGTATTGAAAGAGAGAGACTTCAGCTGCTGGGCATTACTTGCATGCTAATTGCCTCAAAATACGAAGAAGTTAACGCCCCTCATATTGAAGACTTCTGCTTCATCACAGATAACACATACACAAAAGAGGAGGTAGTAAAACTGGAATCTCTAGTGCTGAAGTCCTCTTCATATCAACTATTTGCTCCTACTACCAAAACTTTCCTCAGGAGGTTTCTTCGAGCAGCACAAGCTTCCTACAAGAGACCTAGCATTGAGTTGGAGTACTTGGCAAATTACCTGGCTGAACTAACACTGATGAACTATGGTTTCTTAAATTTCCTTCCTTCTAGGATTGCTGCATCTGCCGTGTTTCTCGCACGATGGACATTAGATCAGTCAAGCCACCCATGGAATCCAACTCTTGAACACTATACCTCTTACAAAGCATCAGATTTGAAAGCTACAGTTCTTGCATTACAAGATCTACAACTGAATAGTAATGAAGACTGCCCTTTAACCGCCATCCGCAAGAAGTACACACAAAACAAGCTCAATTGTGTAGCAGCTTTATCTTCACCAAAACTGCTTGAAACAACGTTCTGA 1455 0.422 MRNNVTLKAGEVPSRLTRARAVALSTTGQLPPLKEVAPGTQDQKHPLRANSKRAVSDVTYLPHKKRAILQDVTNNCGENTKRSCLNPTEIQAKKRKVAKPAQPDISNEVPSAAELPPFIADSKPVSSMEMRLRSSEDVRCLYDLEDNAPLRISANQCGTDNDLLQSQTSRISAWPSSSRKKASQIVAAKKCNISELLNVSKLPDVADIDTDFEDPQLCSHYAADVYDHLRVAELSRRPYPNFMETVQQDITPSMRAILVDWLVEVSEGYKLQANTLYLAVYLIDWFLSKNCIERERLQLLGITCMLIASKYEEVNAPHIEDFCFITDNTYTKEEVVKLESLVLKSSSYQLFAPTTKTFLRRFLRAAQASYKRPSIELEYLANYLAELTLMNYGFLNFLPSRIAASAVFLARWTLDQSSHPWNPTLEHYTSYKASDLKATVLALQDLQLNSNEDCPLTAIRKKYTQNKLNCVAALSSPKLLETTF 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04251 484 FunFam Mitotic cyclin 6 238 338 - -
Mepo6g04251 484 SUPERFAMILY Cyclin-like 213 346 IPR036915 -
Mepo6g04251 484 MobiDBLite consensus disorder prediction 24 52 - -
Mepo6g04251 484 CDD CYCLIN_AtCycA-like_rpt2 353 467 - -
Mepo6g04251 484 PANTHER CYCLINS 174 465 IPR039361 -
Mepo6g04251 484 SMART Cyclin_C_2 353 477 IPR004367 -
Mepo6g04251 484 Gene3D - 238 351 - -
Mepo6g04251 484 Gene3D - 224 473 - -
Mepo6g04251 484 Pfam Cyclin, N-terminal domain 224 345 IPR006671 -
Mepo6g04251 484 SUPERFAMILY Cyclin-like 353 479 IPR036915 -
Mepo6g04251 484 SMART cyclin_7 357 445 IPR013763 -
Mepo6g04251 484 SMART cyclin_7 260 344 IPR013763 -
Mepo6g04251 484 Pfam Cyclin, C-terminal domain 353 476 IPR004367 -
Mepo6g04251 484 PIRSF Cyclin_A_B_D_E 17 483 IPR046965 GO:0016538|GO:0044772
Mepo6g04251 484 FunFam Cyclin A1 340 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04251 Mepo-Chr6 54607629 54611754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04251 16 484 Core Cell Cycle Gene Families AT1G80370 50.734 3.90e-149 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04251 K06627 - gmx:100793657 573.933