Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04235 ATGGGTATGAACTGTAACAGAGTAGAACACTTTGAAGAAACAAGAATGAAAATTCAAACAGAGATTCCAATTCATCAAGTTCGTTTACCACCAGAGACAACATCATTCAACAAACTCAAACACAGACTCTCTGAAATCTTCTTCCCTGATGATCCTTTACACCGTTTCAAAAACCAACCTTCTTTTACAAAGTTTCTTCTTACCCTTCAATTCTTGTTCCCCATTTTTCAATGGGGTTCTCAGTATACTTTCACCCTTCTTCGTTCTGATGTCATATCTGGTCTCACCATTGCCAGCCTTGCCATTCCTCAGGGAATTAGCTATGCAAAGCTTGCAAACTTGCCTCCTATTATTGGATTGTATTCAAGTTTTGTGCCACCATTGATATATGCTCTGCTTGGAAGTTCAAGACATGTTGGTGTTGGACCAGTTTCAATTGCATCTTTGGTTATGGGATCAATGTTGAGTGAAACTGTTTCTTTCACTCAAAATCCTACTCTTTATCTTCAATTGGCTTTCACTGCCACCTTTGTTGCTGGTTTATTCCAAGCATCACTTGGTATACTAAGGCTAGGCTTTGTGATTGATTTTCTGTCAAAAGCAACACTGGTCGGTTTCATGGCCGGTGCTGCTATCATTGTGTCACTGCAGCAATTGAAAGGGTTACTTGGAATTGTGCACTTTACCAACAAGATGCAAATTATTCCTGTATTGGTCTCTGTTTACAAGCAAAAGGATGAGTGGTCATGGCAAACTATTGTTATGGGATTTGGCTTTTTGGCATTCCTGCTCACAACAAGACACATTAGTTTGAGGAAACCAAAACTATTCTGGGCTTCAGCAGCTGCTCCTTTAACATCAGTCATTCTTTCAACCATCTTAGTCTTCCTTCTCAGAAATAAGGCTCATCACATTTCAGTTATTGGGCACTTAGCAAAGGGAGTTAATCCACCATCAGTAAACCTGTTATACTTCAATGGTCCTTACTTGGCTCTTGCTATCAAAACAGGCATTGTCACAGGAATCCTATCTCTCACAGAAGGAATTGCAGTAGGTAGAACATTTGCAGCACTTAAGAACTACCAAGTGGATGGAAACAAAGAAATGATGGCTATTGGTATTATGAACATAGCTGGCTCTTGTACTTCATGCTATGTCACAACAGGATCCTTTTCTCGATCGGCTGTTAACTACAATGCCGGAGCACAGACAGCGGTTTCTAATATAATCATGGCTTCAGCTGTCCTAGTGACCCTTTTGTTTCTCATGCCTCTTTTTTACTATACACCAAACGTTGTCTTAGCGACCATCATCATCGCCGCCGTGATTGGATTAATAGATTATCAAGCTGCATATAAACTGTGGAAGGTTGACAAACTTGATTTCTTGGCCTGCATGTGCTCCTTTTTTGGTGTTCTGTTCATTTCTGTACCTTTAGGCCTCAGTATCGCGGTTGCTATATCAGTCTTCAAGATCCTACTTCATGTCTCCAGACCAAACACTTTGGTGTTAGGAAACATACCTGGAACACAGATATTCCATAACATAAACCAATACAAAGAAGCTTTAAGGGTTCCTTCTTTTCTCATTTTGGCTGTTGAGTCTCCAATCTATTTCGCTAATTCGACTTACCTTCGAGAGAGGATACTAAGATGGGTTCGAGAAGAGGAAGAGCGTATAAAAGAATATAACGGAACTCCATTGCAGTGCATAATTTTAGACATGACAGCTGTCACAGCAATAGACACAAGTGGGCTTGAAACTTTAGGTGAACTTAGAAAGATGCTAGAAAAGAGATCACTTCAGCTTGTGCTGGTAAATCCTGTTGGAAATGTGATGGAAAAGTTACATATGTCGAAAATTTTGGATACCTTTGGATTTAAAGGACTCTATCTCACAGTGGGAGAAGCTGTTGCTGACATTTCAAAATCTGAGAAAGCTCAACCTTGA 1950 0.4 MGMNCNRVEHFEETRMKIQTEIPIHQVRLPPETTSFNKLKHRLSEIFFPDDPLHRFKNQPSFTKFLLTLQFLFPIFQWGSQYTFTLLRSDVISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYALLGSSRHVGVGPVSIASLVMGSMLSETVSFTQNPTLYLQLAFTATFVAGLFQASLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTNKMQIIPVLVSVYKQKDEWSWQTIVMGFGFLAFLLTTRHISLRKPKLFWASAAAPLTSVILSTILVFLLRNKAHHISVIGHLAKGVNPPSVNLLYFNGPYLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGIMNIAGSCTSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLATIIIAAVIGLIDYQAAYKLWKVDKLDFLACMCSFFGVLFISVPLGLSIAVAISVFKILLHVSRPNTLVLGNIPGTQIFHNINQYKEALRVPSFLILAVESPIYFANSTYLRERILRWVREEEERIKEYNGTPLQCIILDMTAVTAIDTSGLETLGELRKMLEKRSLQLVLVNPVGNVMEKLHMSKILDTFGFKGLYLTVGEAVADISKSEKAQP 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04235 649 ProSiteProfiles STAS domain profile. 518 641 IPR002645 -
Mepo6g04235 649 PANTHER SULFATE TRANSPORTER 36 643 IPR001902 GO:0016020|GO:0055085
Mepo6g04235 649 CDD STAS_SulP_like_sulfate_transporter 519 634 - -
Mepo6g04235 649 Pfam Sulfate permease family 87 467 IPR011547 GO:0016020
Mepo6g04235 649 NCBIfam sulfate permease 74 637 IPR001902 GO:0016020|GO:0055085
Mepo6g04235 649 SUPERFAMILY SpoIIaa-like 524 640 IPR036513 -
Mepo6g04235 649 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Mepo6g04235 649 Gene3D STAS domain 498 644 IPR036513 -
Mepo6g04235 649 FunFam Sulfate transporter 31 498 644 - -
Mepo6g04235 649 Pfam STAS domain 519 637 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04235 Mepo-Chr6 54409152 54414462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04235 1 649 Inorganic Solute Cotransporters AT3G15990 76.110 0.0 1024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04235 K17471 - gmx:100812617 1083.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04235 6 54409152 54414462 Mepo6g04235 6 54409152 54414462 ECH
Mepo6g04235 6 54409152 54414462 Mepo2g00278 2 3161176 3167634 PCT