Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04233 ATGGATGACATTGATGATGATGCAATTGCAAGGTATCCCTCTAACCCATATGGTGTTGGTTACCCTAACAATCAAGGGTATGGTTATCTGAAACACCCTTTGAGGAATTCTTCATATTCCCATCCAGCTGCAAATGAATCTACCCGAGATTATGATCACGTCGATGATGAAGATCGGTTAGGAGGGAATGATGATGAAGACCGGTTAGGAGGGTTAGGAGGGAATGATGATGAAGATCGGTTAGGAGGGAATGATGATGATGAAGACCGGTTAGGAGGGAACGATGATGATGTTGCTGATGATGATGTTGATCAACATTCCTTAAAGCAGGCTGATGAAGATGATGACTCCGATGGGGGTGGTGATGAAAATGATGATAATGACCAACAAAGTGAGGAATATGGTTATCTGAAAGATTCTGTGAGGAATTCTCCATATTCTCAGCCATTTGTGAATGAAGGTGACAATGATGAGGATGAAGAAGATGAAGAGCGATTAGTGGAGGAAGATGATGATGTTGATATTGATCAAAATAACAATGTTCAGCTTTCCCTAAAGCATGCTGATGAAGAAGATATCAATGATGAGGATGGGGATAGGGATGAAAATGTTGATGACAATGACGGTGATAATGACAATAAGCAGGAAAGTTATGCCATGATGAATGAAGATGAATTAGAGTGGCGCCCAAAAAAGCAAAAGCTAAAGAGTTTGATGTCAACTTATGAATTTGCAGCTCGGGTGCCGACACCGTCGGCTGCAGCTGCTTCAGCTGCTAAACGATCTTTTGGGGTTAGGAATTCCCTTACTGAATGGACTGAGAAGGAGACATTTGTTCTTCTTGATGCTTGGGGTGATCGGTTTCTGCAACATAGAAGGAAGAGTCTTCGATCTGAGGAATGGCAACAAGTTGCAGAAAAGGTATCAGTAGTTTCAAAAGTTGAAAGAACGGGTACTCAGTGTAGAAATCGTTTAGATACATTGAAGAAAAAATACAAAAAGGACAGGATTAAGTTTCAAGATATGGGTGGTGGAGATAGAAAATGGGTTTATTTTCAAAAGATGGATAAGCTAATGTCTTCTCCACCACAACAAGCAAGACTCTCTTGTCGTTCGAATTCAAGAGAACATATTTTTATGAAGCCTGGAGTTTATGTAAATCATGCAAATGAGATGGATGACATGAAGGATAGTCCTCCTGAAAATACAGAATCCGTCCGTGTAGAAGGTTTTGAAGGGCCTCGCCCAAAGAAAAGAAGGAAAGGAAGGGGAAGTGATGAGGGTTCTTCCTTCAAATTACTTGCTGATTCCATTCAGAATTTTGGTAAGATATATGAGAAGATTGAAAATAGTAAAAGACAGCAGATGATGGAACTAGAAAAGATGAGGATGGATTTCCTCAACGATTTGGAAGCACAAAAGAGACAGATTTTTGAAAGATTGCAGAGTGAGATTTTAAAAGTCGAGCAAAGAGATGATTAG 1482 0.4001 MDDIDDDAIARYPSNPYGVGYPNNQGYGYLKHPLRNSSYSHPAANESTRDYDHVDDEDRLGGNDDEDRLGGLGGNDDEDRLGGNDDDEDRLGGNDDDVADDDVDQHSLKQADEDDDSDGGGDENDDNDQQSEEYGYLKDSVRNSPYSQPFVNEGDNDEDEEDEERLVEEDDDVDIDQNNNVQLSLKHADEEDINDEDGDRDENVDDNDGDNDNKQESYAMMNEDELEWRPKKQKLKSLMSTYEFAARVPTPSAAAASAAKRSFGVRNSLTEWTEKETFVLLDAWGDRFLQHRRKSLRSEEWQQVAEKVSVVSKVERTGTQCRNRLDTLKKKYKKDRIKFQDMGGGDRKWVYFQKMDKLMSSPPQQARLSCRSNSREHIFMKPGVYVNHANEMDDMKDSPPENTESVRVEGFEGPRPKKRRKGRGSDEGSSFKLLADSIQNFGKIYEKIENSKRQQMMELEKMRMDFLNDLEAQKRQIFERLQSEILKVEQRDD 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04233 493 MobiDBLite consensus disorder prediction 1 229 - -
Mepo6g04233 493 Coils Coil 445 476 - -
Mepo6g04233 493 MobiDBLite consensus disorder prediction 210 229 - -
Mepo6g04233 493 MobiDBLite consensus disorder prediction 153 176 - -
Mepo6g04233 493 Gene3D - 272 334 - -
Mepo6g04233 493 MobiDBLite consensus disorder prediction 390 427 - -
Mepo6g04233 493 MobiDBLite consensus disorder prediction 134 151 - -
Mepo6g04233 493 MobiDBLite consensus disorder prediction 115 130 - -
Mepo6g04233 493 MobiDBLite consensus disorder prediction 390 429 - -
Mepo6g04233 493 MobiDBLite consensus disorder prediction 194 209 - -
Mepo6g04233 493 MobiDBLite consensus disorder prediction 46 79 - -
Mepo6g04233 493 MobiDBLite consensus disorder prediction 80 101 - -
Mepo6g04233 493 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 259 491 IPR044823 -
Mepo6g04233 493 ProSiteProfiles Myb-like domain profile. 272 329 IPR001005 -
Mepo6g04233 493 Pfam Myb/SANT-like DNA-binding domain 271 358 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04233 Mepo-Chr6 54397406 54399496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04233 393 491 Trihelix Transcription Factor Family AT3G14180 40.404 7.66e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo6g04233 Myb_DNA-bind_4 5.9e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04233 - - psat:127087507 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04233 6 54397406 54399496 Mepo6g04233 6 54397406 54399496 ECH