Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04229 ATGCCTAAGAAGCTTCAAAAAACCCTTCAAGATTACCTCAACAAAATCAAAAACAAAAACCCACAACCTCAAATTCGATTAACCAAAATGCTCTCTGGCTGCAAACATCCTAAAACACCATCTTTTTCCTTGGATAACGGCAGAAACATATCATCCTCTAACGCCGTTAACAACAAAATCAATGATGCTGCAACACTAGCTGACGTTGACCGTTTTCTCTTTGAGAATTTCAAGTCTCTATATTTCAAAGATGATGAAGAAACAGAACAAAACAACAACAAAAACAAAAGAATCTCGGATGAAAAAAACAACGAGGAACCACCAAAACGTATTGGTGGTTCCTGGTTGTTGGAATCACCGAGATTCATTACAACACCACCTCAAGATCTTTGTGGCTCAGCACGATTCTTCGTGAAACCAGGTAACTCAGGATCATTGATGGAAGATGCACTGTCTCTAACAAACAGTGATGAAGCTGATTCGAGTAATTCGAATAATTCAAATTCATCATCAACAGCATCACCTTCAAAAGAGGTTATTGTAGTAAACCATGATGATCACAATCATCACACTCTTCCAGAGAATTGTGTTGCACTGTTATCATATTCTCCGAGTCCTTACGATGATTTCAGGCGATCCATGCAAGAATTGGTGGAATCAAAGTATGGTAAGATTGAAAACAATCAAAGGAAAATTGATTGGGACTTCATGGAGGAGATTTTGTTTTGTTATCTTAATGTTAATGAGAAAAAATCTCATAAGTTTATATTAAGTGCTTTTGTTGATCTCATCACTGTTATGAGGAAGAATTCAGAGGCTGCTCCGGCAAAGCCGTGTAGCGTGAGAACTGTTAGGATTGGTAGGGAAGTCAGGAAGAAGAAGACCAAGCAGGTTACCATAGAATTTGGTTCCTCTTAG 918 0.3813 MPKKLQKTLQDYLNKIKNKNPQPQIRLTKMLSGCKHPKTPSFSLDNGRNISSSNAVNNKINDAATLADVDRFLFENFKSLYFKDDEETEQNNNKNKRISDEKNNEEPPKRIGGSWLLESPRFITTPPQDLCGSARFFVKPGNSGSLMEDALSLTNSDEADSSNSNNSNSSSTASPSKEVIVVNHDDHNHHTLPENCVALLSYSPSPYDDFRRSMQELVESKYGKIENNQRKIDWDFMEEILFCYLNVNEKKSHKFILSAFVDLITVMRKNSEAAPAKPCSVRTVRIGREVRKKKTKQVTIEFGSS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04229 305 NCBIfam uncharacterized plant-specific domain TIGR01568 197 266 IPR006458 -
Mepo6g04229 305 MobiDBLite consensus disorder prediction 85 115 - -
Mepo6g04229 305 MobiDBLite consensus disorder prediction 154 175 - -
Mepo6g04229 305 MobiDBLite consensus disorder prediction 85 108 - -
Mepo6g04229 305 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 62 267 IPR038933 GO:0045892
Mepo6g04229 305 ProSiteProfiles OVATE domain profile. 199 266 IPR006458 -
Mepo6g04229 305 Pfam Transcriptional repressor, ovate 203 265 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04229 Mepo-Chr6 54357879 54359264 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mepo6g04229 Ovate 1.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04229 - - lja:Lj3g3v0160750.1 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04229 6 54357879 54359264 Mepo6g04229 6 54357879 54359264 ECH
Mepo6g04229 6 54357879 54359264 Mepo2g00284 2 3221162 3222040 PCT