Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04220 ATGGAGTTTTGGCAAGAAAATGTTGTGATGAACAATTTGGGGAGAGAGTTTGTAGCTGGTGGATTTGGAGGCACTGCTGGTATCATCTCAAGTTATCCATTGGATACAGTTCGTGTCATGCAACAACAATCTGGCAATGCATCTGCTATCAACATCGTTAGAAATTTGTTGGCAAAGGAAGGACCTACTGCTTTGTATCGTGGTATGGCTGTTCCTTTGGCCTCTGTTGGTTTTCAGAATGCTATGATTTTTCAAAGTTATACCGTTCTTACAAGAATTTTTAGCCCTTCTACTTCCTCACATGGACCTCCTTCCATGGTGAATGTTGCTTTAGGAGGACTTGGTGCAGGTGCTCTCCAAAGTCTTTTGATCTCCCCTGTTGAGCTGATTAAAATTCGCCTTCAACTACAAAAAAACATAGGTCATTTTTCTGAAAACAAAAGGAGTGCTCCCATGAGTCTTGCTAAGAACATTTGGAAAAATGAGGGCCTTCGCGGCATTTATCGAGGATTTGGCATCACTGTTCTTAGAGATGCACCTGCTCTTGCCTTATACTTTGGGACATATGAGTACACAAGAGAGAGACTTCACCCTGGTTGTAGAGAAAGTTGTCAAGAAAGTGTGAGTACTATGTTTGTAGCAGGGGGATTGGCAGGGATAGCAAGTTGGCTTTTCAACTACCCTACAGATGTTATAAAGACAAGATTACAAGCTCAAACATCTTCTTCATTGAAATACAAAGGCATCTTGGATTGCACCCTAAAGATAATCAAAGATGAAGGTTCTGTTGTGCTATGGAGAGGTTTAGGAGCAACACTTGTTAGAGCATTTGTTATGAATAGTGCTATATTTCCTGCTTATCAAGTCGCTCTAAGGTGTCTTGTCAACGATTAA 894 0.4094 MEFWQENVVMNNLGREFVAGGFGGTAGIISSYPLDTVRVMQQQSGNASAINIVRNLLAKEGPTALYRGMAVPLASVGFQNAMIFQSYTVLTRIFSPSTSSHGPPSMVNVALGGLGAGALQSLLISPVELIKIRLQLQKNIGHFSENKRSAPMSLAKNIWKNEGLRGIYRGFGITVLRDAPALALYFGTYEYTRERLHPGCRESCQESVSTMFVAGGLAGIASWLFNYPTDVIKTRLQAQTSSSLKYKGILDCTLKIIKDEGSVVLWRGLGATLVRAFVMNSAIFPAYQVALRCLVND 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04220 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 293 IPR018108 -
Mepo6g04220 297 Pfam Mitochondrial carrier protein 105 196 IPR018108 -
Mepo6g04220 297 Pfam Mitochondrial carrier protein 13 95 IPR018108 -
Mepo6g04220 297 Pfam Mitochondrial carrier protein 207 295 IPR018108 -
Mepo6g04220 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 93 IPR018108 -
Mepo6g04220 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 13 294 - -
Mepo6g04220 297 SUPERFAMILY Mitochondrial carrier 13 287 IPR023395 -
Mepo6g04220 297 Gene3D Mitochondrial carrier domain 9 296 IPR023395 -
Mepo6g04220 297 PRINTS Mitochondrial carrier protein signature 215 237 IPR002067 GO:0055085
Mepo6g04220 297 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Mepo6g04220 297 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Mepo6g04220 297 PRINTS Mitochondrial carrier protein signature 119 137 IPR002067 GO:0055085
Mepo6g04220 297 PRINTS Mitochondrial carrier protein signature 168 186 IPR002067 GO:0055085
Mepo6g04220 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 195 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04220 Mepo-Chr6 54288349 54290250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04220 1 297 Antiporters AT1G79900 60.403 7.52e-113 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04220 K15109 - gmx:100801221 397.512