Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04219 ATGGCTGATATGTTCGACGTTCATGCACAATTCAACGGTGGAGAACCTCAGAGGTTGAAGGTTTGGCACCTTGTTGTCACGTTAAGAGGTATCAAAGATCAACTGAATGAATTCAACCAAGGAGTCAACCCCGGAGACACAAGGAGGGTGAAATACGTTCGAAAAAAGAGAATGGAGTTTTGGACAGAAAATGTTGTGATGAACAGTTTGGGAAGAGAGTTTGTAGCTGGAGGATTTGGAGGCACTGCTGGTATAATCTCAAGTTACCCTTTGGATACTCTTCGTGTCATGCAACAACAATCTGGCAATGCATCTGCTACTAGCATCTTTAGAAATTTGTTGGCTAAGGAAGGACCTACTGCTTTGTACCGTGGCATGGCTGCTCCATTGGCCTCTGTTGGTTTTCAGAACGCTATGATTTTTCAAAGTTATACAATTTTCACAAGGATGTGTAGCCCTTCCAATGGACCTCCTTCCCTTGCAAATGTTGCTTTAGGAGGACTTGGTGCAGGTGCTCTTCAAAGTCTGTTGATCTCCCCTGTTGAGCTGATTAAAATTCGCATTCAACTACAAAAAAACATAGATCATTTTCCTAAAAATAAAAGGAGTGCTCCCATGAATCTGGCTAAGAACATTTGGAAAAATGAGGGCCTTTGCGGCATTTATCGAGGATTTGGCATTACTGTTCTTAGAGATGCACCTGCTCTTGCCTTATACTTTGGGGCATATGAGTACACAAGAGAGAAACTTCACCCTGGTTGCAGAGAAAGTTGTCAAGAAAGTGTGAGTACTATGTTTATAGCAGGAGGATTAGCAGGGATAGCTAGCTGGCTTTTCAACTACCCTACAGATGTTATAAAGACAAGATTACAAGCTCAAACATCTTCTTCATTGAAATACAAAGGCATCTTGGATTGCACCCTAAAGATAATTAAAGATGAAGGTTCTATTGTGCTATGGAGAGGTTTAGGAGCAACACTTGTTAGAGCATTTGTTATGAATAGTGCTATATTTCCTGCTTATCAAGTCGCTCTAAGATGTCTAATCAACAATTAA 1056 0.4091 MADMFDVHAQFNGGEPQRLKVWHLVVTLRGIKDQLNEFNQGVNPGDTRRVKYVRKKRMEFWTENVVMNSLGREFVAGGFGGTAGIISSYPLDTLRVMQQQSGNASATSIFRNLLAKEGPTALYRGMAAPLASVGFQNAMIFQSYTIFTRMCSPSNGPPSLANVALGGLGAGALQSLLISPVELIKIRIQLQKNIDHFPKNKRSAPMNLAKNIWKNEGLCGIYRGFGITVLRDAPALALYFGAYEYTREKLHPGCRESCQESVSTMFIAGGLAGIASWLFNYPTDVIKTRLQAQTSSSLKYKGILDCTLKIIKDEGSIVLWRGLGATLVRAFVMNSAIFPAYQVALRCLINN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04219 351 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 70 348 - -
Mepo6g04219 351 Pfam Mitochondrial carrier protein 70 151 IPR018108 -
Mepo6g04219 351 Pfam Mitochondrial carrier protein 160 250 IPR018108 -
Mepo6g04219 351 Pfam Mitochondrial carrier protein 261 350 IPR018108 -
Mepo6g04219 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 68 150 IPR018108 -
Mepo6g04219 351 SUPERFAMILY Mitochondrial carrier 70 341 IPR023395 -
Mepo6g04219 351 Gene3D Mitochondrial carrier domain 70 350 IPR023395 -
Mepo6g04219 351 PRINTS Mitochondrial carrier protein signature 222 240 IPR002067 GO:0055085
Mepo6g04219 351 PRINTS Mitochondrial carrier protein signature 86 100 IPR002067 GO:0055085
Mepo6g04219 351 PRINTS Mitochondrial carrier protein signature 269 291 IPR002067 GO:0055085
Mepo6g04219 351 PRINTS Mitochondrial carrier protein signature 73 86 IPR002067 GO:0055085
Mepo6g04219 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 260 347 IPR018108 -
Mepo6g04219 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 158 249 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04219 Mepo-Chr6 54277115 54281014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04219 58 351 Antiporters AT1G79900 60.738 5.53e-110 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04219 K15109 - gmx:100801221 383.645