Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04215 ATGAGCATAGGAGGGATTGGTTCAATTAACATGCTACAGCTCATGTCTTTGGATTGGAAATTTGGATTAAGATCAAGTTTCCTCCTCTCATCAACCGAACATGACTCGACGGCGAGGAATCCTATATCTCCTCTCTCCTTGGCCATCCCGTCGAGGTTTAAGATCTGCAACCCATCCTCTTCTTCTGCTCAGTTGTTGGCTGAGGTGATGGATATGCGAGAATTGAGAAGGAATGTTTGTGATTCTGTTCCAAGCAGTATCAGAGCAAAGAGAGGCTTTGCAACACATCCTAGAAGCCTTGCCGAAAGGGTAAGAAGAACTCGGATAAGTGAACGAATGAGAAAATTGCAAGAGACTGTTCCAAACATTGATAAGATATTAAAGTTTTCACAGAGAACTTGGATGAGGTATTTCCAATATTTGATGCTTCTCTTTGAGTTGTGCATTATAGATGAGAATGAATGTATTACTAGGAGGGCTGTGTATGGTATTCTTGGTGTTATTAGATTAATGCTTAAGAAAAGGGGCAAGTCTGAAGATGTAGTGGCCGATGTTGATAGGATTCTCAGGCCTGAGGGGAAGCTTAATATTGTCCGAGACACTACTGAGATCATTAACGAGCTGGAAAGCTTGAGGAAGTCTATGCAGTGA 651 0.4194 MSIGGIGSINMLQLMSLDWKFGLRSSFLLSSTEHDSTARNPISPLSLAIPSRFKICNPSSSSAQLLAEVMDMRELRRNVCDSVPSSIRAKRGFATHPRSLAERVRRTRISERMRKLQETVPNIDKILKFSQRTWMRYFQYLMLLFELCIIDENECITRRAVYGILGVIRLMLKKRGKSEDVVADVDRILRPEGKLNIVRDTTEIINELESLRKSMQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04215 216 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 171 216 IPR004159 GO:0008168
Mepo6g04215 216 Gene3D - 89 215 IPR036638 GO:0046983
Mepo6g04215 216 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 61 125 - -
Mepo6g04215 216 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 95 136 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04215 Mepo-Chr6 54252844 54256800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04215 66 135 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G35460 57.143 5.15e-20 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04215 - - tpra:123888389 88.9669