Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04201 ATGACACAACCATTGCTTTTGCTCCTTAAAAAACACAACACCCTTCTTTCTTCACCAACGTTGTCAATGTGTGCAGACATGTCTAATAATAATCCTCCTTCTACTTCTAAAGCCAAAGACTTCTTTCCCTCTCCAGCTCTCTCTCTTAGCCTTGCAGGGATTTTTCGGCATGGTGGTGCGGCCACGGCGGAGGGTGAAGGAGGGAGTACTAGTAATATGGAGGTGGAAGAAGGGGAGGAAGGGAGTACAATAGGAGGTGAGCGTGTGGAGGAAATTAGCAGTGAGTATTCAGGTCCAACAAAATCCAAATCAATGGATGAATTTGAAGGAGATGAAGATGATGAAGGTGAAGATGATGAAGGTGATGGTGATGGTGATAATAAGAACAAGAAGAAGAAAAGGAAGAAATATCACAGGCACACTTCTGAACAGATCAGAGTCATGGAAGCGCTTTTCAAAGAGTCACCACATCCTGATGAAAAGCAGAGGCAACAACTTAGCAAGCAATTAGGTCTTGCTCCAAGGCAAGTCAAATTTTGGTTCCAAAATCGTCGTACCCAAATCAAGGCAATACAAGAGCGACATGAAAATTCATTGTTGAAATCAGAAATAGAGAAACTAAGGGAGAAAAATAAGACCCTACGAGAGACCATAAATAAGGCTTGTTGCCCCAATTGTGGGGTCCCCACCACAAACAGAGATGGTGCCATGGCAACTGAAGAACAACAACTACGTATTGAAAATGCCAAACTCAAAGCTGAGGTAGAGAGGCTCAGAGCAGCTTTAGGGAAATATGCATCAGGGGCAATGTCACCTTCATGTTCCACTAGCCATGACCAAGAGAATATTAAAAGCTCTTTGGATTTTTATACTGGAATTTTTGGTCTCGATGAGTCAAGGATAATGGATGTAGTAAACCAAGCAATGGAGGAGCTTATAAAGATGGCTACAATGGGTGAACCAATGTGGTTACGTAGCTTAGAGACCGGTCGCGAAATACTTAATTATGACGAATATATGAAGGAGTTTGCAGTTGAAAATTCAGACCATGGTAGACCAAAGAGATCCATTGAAGCTTCAAGAGATACAGGAGTTGTTTTTGCAGATCTTCCTCGGATTGTCCAATGTTTTCTTGATGCTAATCAATGGAAGGAAATGTTTCCATGTTTAATATCTAAGGCAGCAACAGTTGACACTATATGCAAAGGAGAAGGTTCTAACAAGAATGGTGCAGTGCAACTGATGTTTGCTGAGTTGCAAATGTTAACACCAATGGTTCCAACTAGAGAAGTGTATTTTGTCAGATACTGCAAACAATTGAGTGGTGAAAAATGGGCTATTGTTGATGTGTCCATAGACAAAGTAGAAGACAACATTGACAAGTCCCTAGTGAAATGCAGAAAACGCCCATCTGGTTGCATTATTGAGGATAAGTCAAATGGACATTGCAGAGTAGTATGGGTTGAGCATTTGGAGTGTCAAAAGAGTGTAGTTCATTCAATGTATCGCACCATTGTCAACAGTGGCCTAGCTTTTGGGGCAAGGCATTGGATTGCGACCCTTCAACTTCAATGTGAACGTCTAGTTTTCTTCATGGCAACAAACGTTCCCATGAAGGATTCAACTGGTGTTGCCACATTGGCTGGAAGAAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGAGTTTCTGTCAAGCAATTAGTGCTTCAAGCTTCCATACATGGACTAAGGTTACTAGTAAAACTGGAGAAGACATAAGGATTAGTTCTAGAAAGAATTTGAATGATCCTAGTGAACCTCTTGGATTGATAGTTTGTGCTGTTTCTTCTATATGGTTGCCTATATCTCCTAATGTTTTGTTTGATTTCTTGAGGGACGAAGCTCGTCGAACTGAGTGGGATATAATGTCTAGTGGCGGGACAGTACAATCCATTGCAAATTTATCCAAGGGACAAGATAGAGGCAATGCAGTAACTATCCAAACAATTAAATCAAAAGAAAACAATATGTGGATACTGCAAGATAGCTGCACAAATTCTTATGAGTCAATGGTGGTATATGCGCCTGTGGATATTACTGGTATTCAATCTGTGATGACCGGATGCGATTCGAGCAATCTAGCCATACTGCCCTCCGGATTTTCAATTGTTTCTGATGGCTTGGAGTCGAGGCAAATGGTAATTACTTCGAGGCGGGAAGAGAAAAATACAGAAGGAGGATCTTTGTTTACAATAGCATTCCAAATCCTTACAAATGCTTCTCCTACAGCCAAATTAACTATAGAGTCTGTGGACTCTATGAACTCTCTTGTATCATGTACATTGAGACACATCAAAACAAGTCTAAATTGCGAAGATGGTTAG 2367 0.409 MTQPLLLLLKKHNTLLSSPTLSMCADMSNNNPPSTSKAKDFFPSPALSLSLAGIFRHGGAATAEGEGGSTSNMEVEEGEEGSTIGGERVEEISSEYSGPTKSKSMDEFEGDEDDEGEDDEGDGDGDNKNKKKKRKKYHRHTSEQIRVMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKSEIEKLREKNKTLRETINKACCPNCGVPTTNRDGAMATEEQQLRIENAKLKAEVERLRAALGKYASGAMSPSCSTSHDQENIKSSLDFYTGIFGLDESRIMDVVNQAMEELIKMATMGEPMWLRSLETGREILNYDEYMKEFAVENSDHGRPKRSIEASRDTGVVFADLPRIVQCFLDANQWKEMFPCLISKAATVDTICKGEGSNKNGAVQLMFAELQMLTPMVPTREVYFVRYCKQLSGEKWAIVDVSIDKVEDNIDKSLVKCRKRPSGCIIEDKSNGHCRVVWVEHLECQKSVVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCQAISASSFHTWTKVTSKTGEDIRISSRKNLNDPSEPLGLIVCAVSSIWLPISPNVLFDFLRDEARRTEWDIMSSGGTVQSIANLSKGQDRGNAVTIQTIKSKENNMWILQDSCTNSYESMVVYAPVDITGIQSVMTGCDSSNLAILPSGFSIVSDGLESRQMVITSRREEKNTEGGSLFTIAFQILTNASPTAKLTIESVDSMNSLVSCTLRHIKTSLNCEDG 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04201 788 SMART START_1 303 527 IPR002913 GO:0008289
Mepo6g04201 788 FunFam Homeobox-leucine zipper protein GLABRA 2 303 526 - -
Mepo6g04201 788 SUPERFAMILY Bet v1-like 556 780 - -
Mepo6g04201 788 Pfam START domain 305 527 IPR002913 GO:0008289
Mepo6g04201 788 SUPERFAMILY Bet v1-like 297 527 - -
Mepo6g04201 788 Coils Coil 190 220 - -
Mepo6g04201 788 Gene3D - 303 522 IPR023393 -
Mepo6g04201 788 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 130 784 IPR042160 -
Mepo6g04201 788 Pfam Homeodomain 134 189 IPR001356 GO:0003677
Mepo6g04201 788 FunFam Homeobox-leucine zipper protein HDG1 120 207 - -
Mepo6g04201 788 SMART HOX_1 133 195 IPR001356 GO:0003677
Mepo6g04201 788 MobiDBLite consensus disorder prediction 60 144 - -
Mepo6g04201 788 Gene3D - 122 203 - -
Mepo6g04201 788 ProSitePatterns 'Homeobox' domain signature. 166 189 IPR017970 GO:0000981|GO:0006355
Mepo6g04201 788 ProSiteProfiles 'Homeobox' domain profile. 131 191 IPR001356 GO:0003677
Mepo6g04201 788 CDD homeodomain 138 189 IPR001356 GO:0003677
Mepo6g04201 788 SUPERFAMILY Homeodomain-like 123 192 IPR009057 -
Mepo6g04201 788 ProSiteProfiles START domain profile. 294 530 IPR002913 GO:0008289
Mepo6g04201 788 CDD START_ArGLABRA2_like 299 526 - -
Mepo6g04201 788 MobiDBLite consensus disorder prediction 108 122 - -
Mepo6g04201 788 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04201 Mepo-Chr6 54148045 54155484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04201 92 787 Homeobox Transcription Factor Family AT1G79840 64.815 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo6g04201 START 1.5e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04201 K09338 - gmx:100808292 1253.43