Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04191 ATGATGGCTGGGAACCCTAACTGGTGGAGCATGCATCCATCATCTTTGAATATCCCTCCTCAATATATGCTTGGATCTTCTTCAATCCCTTTCAATTCCTTGGCAGAAAATAATGCTGAAGTACCTCCTCAATCATGGAGTCAACTACTTTTTACTGGACTACCTGGAGAAGAAGAGAGACTTGGTTTTAATCATTTTCAACCTAAAAACTCAGAAAACTGGGATGTGCAAATTATGAATCCATCTTCAAGAGTTCCTTTTATGGATATAATAAAGCATGAAGTTTCTCAAGGTGAGAATTTTTATGGCCAACAAGGGCATCATGAGGAATTTCATGCTAACTCTGGATCACTTGGTTCATCTTGGTCACATATGGTGCCAGTTTCTTCCCCAAGCTCTCATATCACTAGCTTAAGTAGTGATAATATATTGGATTTCACTTACAACAAGGTAGATCATAGCAAGAATCAACTACCAGATCAAATATCTGAGTGTAATAGCTCAACTAGTGGAGTTAATAAGAAGGCTAGGGTTCAGCCATCTTCAAGCCAACCACCTCTAAAGGTGAGGAAGGAGAAGCTAGGTGATAGAATAACAGCACTTCACCAGCTAGTTTCTCCATTTGGAAAGACTGACACAGCTTCTGTATTATTAGAAGCCATTGGATACATCAGGTTTCTACAGGGTCAAATTGAGGCACTCAGCACCCCTTACTTGGACACTGCAGCATCAAAAAACATGATGAGGAATCAACATTCTGTGCATGTTGAAAGAAATTCTGTATTTCCTGAAGACCCCGGTCAGCTGTTGGATGACACTGGCCTAAAAAGAAAGGGCGCTCCAATTCCAAACCAGAATGGAGAAGGTAATAAAGCAAAGGACTTAAGGAGTAGAGGGTTGTGCTTGGTTCCAGTGTCATGCACACAACATGTTGGAAGTGAAAATGGAGCTGATTATTGGGCACCAGCATTTGGAAGTGGATTTTAA 987 0.4073 MMAGNPNWWSMHPSSLNIPPQYMLGSSSIPFNSLAENNAEVPPQSWSQLLFTGLPGEEERLGFNHFQPKNSENWDVQIMNPSSRVPFMDIIKHEVSQGENFYGQQGHHEEFHANSGSLGSSWSHMVPVSSPSSHITSLSSDNILDFTYNKVDHSKNQLPDQISECNSSTSGVNKKARVQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSTPYLDTAASKNMMRNQHSVHVERNSVFPEDPGQLLDDTGLKRKGAPIPNQNGEGNKAKDLRSRGLCLVPVSCTQHVGSENGADYWAPAFGSGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04191 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 227 IPR011598 GO:0046983
Mepo6g04191 328 Gene3D - 188 254 IPR036638 GO:0046983
Mepo6g04191 328 FunFam Transcription factor bHLH123 family 188 252 - -
Mepo6g04191 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 239 IPR036638 GO:0046983
Mepo6g04191 328 CDD bHLH_AtbHLH_like 188 235 IPR045239 -
Mepo6g04191 328 MobiDBLite consensus disorder prediction 158 186 - -
Mepo6g04191 328 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 33 310 - -
Mepo6g04191 328 MobiDBLite consensus disorder prediction 158 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04191 Mepo-Chr6 53994447 53997839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04191 40 269 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.664 2.76e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04191 - - gmx:100802121 439.499