Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04181 ATGGGTCGTGGCATAGCATTTGGACGCTTTGATGATTCTTTCAGTGTGAGCTCCATTAGGGCTTATGTTGCTGAGTTCATCTCAACCTTGATCTTTGTTTTTGCTGGTGTTGGTTCAGCCATAGCCTATGCTAAGTTGACATCAGGTGCAGCTCTTGATCCTGCTGGATTAGTAGCAGTTGCTGTTTGTCATGGTTTTGCTCTTTTTGTTGCTGTTTCTGTTGGAGCCAACATATCTGGTGGACATGTCAACCCAGCTGTGACCTTTGGGTTGGCTATTGGGGGACAGATCACTATCCTCACTGGTATCTTCTACTGGATTGCACAGCTTCTTGGTTCCATAGTGGCATGCTATCTCCTCAAGTTTGCCACAGGAGGCTTGACAATTCCTATCCACAGTGTTGCTTCTGGTGTTGGAGCTGGTGAAGGAGTTGTGACAGAGATTATCATAACATTTGGATTGGTGTACACAGTGTATGCCACAGCAGCTGATCCTAAGAAAGGGTCATTAGGGACAATTGCACCAATTGCTATAGGTTTGATTGTTGGTGCCAATATCTTAGCTGCAGGACCATTCTCTGGTGGATCAATGAATCCAGCACGTTCATTTGGGCCTGCAGTTGTAAGTGGTGACTACCATAACAACTGGATCTATTGGTTTGGACCTCTTATTGGTGGTGGTTTGGCTGGTGTCATCTATGGCTATGTCTTCATGCCCTCTGACCATGTACCTTTGGCTAGTGATTTTTGA 750 0.4547 MGRGIAFGRFDDSFSVSSIRAYVAEFISTLIFVFAGVGSAIAYAKLTSGAALDPAGLVAVAVCHGFALFVAVSVGANISGGHVNPAVTFGLAIGGQITILTGIFYWIAQLLGSIVACYLLKFATGGLTIPIHSVASGVGAGEGVVTEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGLIVGANILAAGPFSGGSMNPARSFGPAVVSGDYHNNWIYWFGPLIGGGLAGVIYGYVFMPSDHVPLASDF 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04181 249 CDD MIP 20 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04181 249 Gene3D Glycerol uptake facilitator protein. 2 247 IPR023271 -
Mepo6g04181 249 PANTHER AQUAPORIN-8 5 240 IPR034294 -
Mepo6g04181 249 FunFam Probable aquaporin TIP1-1 3 249 - -
Mepo6g04181 249 ProSitePatterns MIP family signature. 82 90 IPR022357 -
Mepo6g04181 249 PRINTS Major intrinsic protein family signature 101 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04181 249 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04181 249 PRINTS Major intrinsic protein family signature 20 39 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04181 249 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04181 249 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04181 249 PRINTS Major intrinsic protein family signature 64 88 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04181 249 NCBIfam MIP family channel protein 24 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04181 249 Pfam Major intrinsic protein 15 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g04181 249 SUPERFAMILY Aquaporin-like 14 243 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04181 Mepo-Chr6 53919726 53920826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04181 4 249 Major Intrinsic Protein MIP AT3G16240 81.452 5.69e-142 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04181 K09873 - twl:120007823 422.935