Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04168 ATGTCTTGTAAAGATGGTAAAGGTGTAATGGATAATGGAAAATACGTTCGTTATACACCTGAACAAGTTGAAGCTCTTGAAAGGCTTTATCATGATTGTCCTAAGCCAAGTAGCATTCGTCGTCAACAGCTTATTCGAGAGTGTCCTATTCTCTCTCATATTGAACCTAAACAGATCAAAGTTTGGTTCCAAAATAGAAGATGTAGGGAAAAGCAGAGAAAAGAGGCTTCAAGATTGCAAGCTGTGAATAGGAAGTTGAGTGCTATGAATAAGCTGCTGATGGAAGAGAATGATAGGTTGCAGAAACAAGTATCTCATTTGGTGTATGAAAATGGCTACTTTCGCCAACATACTCAAAATACTAATCTTGCAACCAAAGATACAAGCTGTGATTCGGCGGTGACTAGTGGTCAACGCAGTTTGACAGCCCAGCATCCGCCAAGGGATGCAAGTCCTGCAGGGCTTTTGTCCATTGCAGAGGAAACTTTAGCAGAGTTTCTTTCAAAGGCTACTGGAACTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGAATCTATTGGAATCGTTGCGATTTCTCATGGTTGCCCTGGTGTGGCGGCAAGAGCATGTGGCCTAGTGGGGCTAGAACCTACAAGGGTTGCAGAAATCCTCAAAGATCGGCCCTCGTGGTATCGTGATTGCCGAGCGGTGGATATTCTGAACGTGCTTCCCACAGCCAATGGTGGAACCATTGAGCTGCTTTACATGCAGCTATATGCGCCAACTACATTGGCTCCTGCTCGAGACTTATGGTTGTTGCGATACACATCTGTTTTAGAAGATGGAAGCCTAGTGATATGTGAGAGGTCTCTTAAAAACACACAAAATGGTCCAAGCATGCCTCCTGTGCAGCATTTTGTCAGAGCTGAGATGCTGCCCAGTGGGTACCTGATAAGGCCTTGTGAAGGAGGTGGTTCCATCATCCACATTGTTGATCATATGGATTTGGAGCCATGGAGTGTTCCCGAGGTACTGCGTCCACTCTATGAATCATCAACAATGCTGGCTCAGAAGACAACAATGGTGGCCCTACGTCACCTAAGGCAGATTTCACATGAAGTTTCTCAGTCTAATGTCACTGGATGGGGTAGACGACCAGCAGCACTTCGAGCACTTGGCCAAAGACTGAGCCGGGGTTTCAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGTCAATGATTGGCAATGATGGTGTTGACGATGTTACTATTCTAGTGAATTCATCACCCGACAAATTAATGGGTCTGAATCTTTCATTTGCCAATGGATTTCCAGCTGTCAGTAATGCAGTCTTATGTGCTAAAGCTTCAATGCTGTTACAAAATGTGCCTCCGGCCATCCTACTAAGGTTTCTACGGGAGCATAGATCAGAGTGGGCAGACAACAACATGGATGCTTACTCAGCTGCTGCCATCAAAGTTGGTCCTTGTAGTTTCTCAGGATCTCGGGTTGGAAATTACGGGGGCCAAGTAATTCTTCCTCTAGCCCACACTATTGAGCACGAGGAGTTTCTGGAAGTCATTAAATTGGAAGGAATTGCCCCTTCTCCCGAAGACGCGATAATGCCTAGAGAAGTGTTTCTTTTGCAACTCTGCAGTGGAATGGATGAGAATGCTGTTGGTACCTGTGCTGAACTTATATTTGCTCCGATTGATGCATCCTTTGCTGATGATGCCCCCCTTCTGCCTTCTGGATTTCGTATCATTCCTCTTGATTCTGGAAAGGAAGTGGCCAACAACCCAAATCGCACCCTTGACCTGACATCTGCCCTAGATATTGGTCCCGCCGGAAACAAAGCTTCTAATGATTATTCTGGAAATTCTGGCTGTATGAGATCAGTAATGACAATAGCATTTGAATTTGCTTTTGAAAGTCATATGCAAGACCATGTAGCATCTATGGCACGCCAGTATGTTCGCAGCATTATATCGTCTGTCCAAAGGGTAGCATTGGCACTTTCACCTTCTAATTTGAATTCACAAGCTGGGCTTAGGACACCACTGGGTACTCCTGAAGCTCAAACACTTGCTCGTTGGATCAGCAACAGTTATAGGTGCTTCTTGGGTGCTGAGCTACTTAAATCTAATAATGAGGGGAGTGAATCATCACTCAAGACTTTGTGGCATCACACCGATGCAATACTCTGCTGCACTCTAAAGGCGTCGCCCGTGTTCACTTTTGCCAACCAGGCAGGGCTTGACATGCTGGAGACTACCTTAGTTGCTCTGCAGGATATAGCATTGGAAAAAATATTTGATGACCATGGCCGAAAGATTCTGTGCTCGGAATTTCCTCTAATTATACAACAGGGTTTTGCATGCCTTCAAGGCGGTCTTTGTCTCTCAAGCATGGGGAGACCTATTTCATATGAAAGAGTAGTGGCTTGGAAGGTGCTGAATGAAGAAGAGAATGCTCATTGTATTTGCTTTATGTTTGTGAACTGGTCTTTTGTTTGA 2511 0.4516 MSCKDGKGVMDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYFRQHTQNTNLATKDTSCDSAVTSGQRSLTAQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPESIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDRPSWYRDCRAVDILNVLPTANGGTIELLYMQLYAPTTLAPARDLWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTMLAQKTTMVALRHLRQISHEVSQSNVTGWGRRPAALRALGQRLSRGFNEALNGFTDEGWSMIGNDGVDDVTILVNSSPDKLMGLNLSFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNMDAYSAAAIKVGPCSFSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGIAPSPEDAIMPREVFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEVANNPNRTLDLTSALDIGPAGNKASNDYSGNSGCMRSVMTIAFEFAFESHMQDHVASMARQYVRSIISSVQRVALALSPSNLNSQAGLRTPLGTPEAQTLARWISNSYRCFLGAELLKSNNEGSESSLKTLWHHTDAILCCTLKASPVFTFANQAGLDMLETTLVALQDIALEKIFDDHGRKILCSEFPLIIQQGFACLQGGLCLSSMGRPISYERVVAWKVLNEEENAHCICFMFVNWSFV 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04168 836 CDD START_ArGLABRA2_like 152 367 - -
Mepo6g04168 836 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 9 836 IPR044830 GO:0003700
Mepo6g04168 836 Pfam Homeodomain 14 72 IPR001356 GO:0003677
Mepo6g04168 836 Gene3D - 192 376 IPR023393 -
Mepo6g04168 836 CDD homeodomain 14 74 IPR001356 GO:0003677
Mepo6g04168 836 SMART HOX_1 11 77 IPR001356 GO:0003677
Mepo6g04168 836 MobiDBLite consensus disorder prediction 125 151 - -
Mepo6g04168 836 Pfam MEKHLA domain 693 835 IPR013978 -
Mepo6g04168 836 CDD bZIP 66 105 - -
Mepo6g04168 836 Gene3D - 7 80 - -
Mepo6g04168 836 Pfam START domain 158 366 IPR002913 GO:0008289
Mepo6g04168 836 FunFam Homeobox-leucine zipper protein REVOLUTA 14 69 - -
Mepo6g04168 836 SUPERFAMILY Bet v1-like 395 593 - -
Mepo6g04168 836 SUPERFAMILY Bet v1-like 157 366 - -
Mepo6g04168 836 Coils Coil 69 103 - -
Mepo6g04168 836 SUPERFAMILY Homeodomain-like 14 77 IPR009057 -
Mepo6g04168 836 MobiDBLite consensus disorder prediction 125 145 - -
Mepo6g04168 836 ProSiteProfiles 'Homeobox' domain profile. 9 73 IPR001356 GO:0003677
Mepo6g04168 836 SMART START_1 157 367 IPR002913 GO:0008289
Mepo6g04168 836 ProSiteProfiles START domain profile. 148 349 IPR002913 GO:0008289
Mepo6g04168 836 FunFam homeobox-leucine zipper protein ATHB-15 193 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04168 Mepo-Chr6 53826567 53834940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04168 1 788 Homeobox Transcription Factor Family AT1G52150 84.703 0.0 1385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo6g04168 START 1.4e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04168 K09338 - zju:107428556 1565.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04168 6 53826567 53834940 Mepo6g04168 6 53826567 53834940 ECH
Mepo6g04168 6 53826567 53834940 Mepo1g04388 1 51502392 51509562 PCT