Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04153 ATGGGAAAAGCTAGTAGATGGTTGAAGGGTTTGTTTGGAATGAAGAAAGAGAAGGAGCATAGTAACAAATCAGGACCATTGGTTCTTGACAAGAAGGAGAAGAAAAGATCAGGGAAGGATGATAATCACATTGACCATCAAACTAGTGCTCCTGCTTTTGATGATGCTTGGTACAAATCCTATGTTGCTGAAAAACAGAAACAGAATGAGCATAACAAAAATGCAATTTTTGTGAGGTCATTAAGCCATGGCAGTGGAAGAAAGTCATTGTTATTTGGAAGCAGGGAGATGTTGGCTGCTGTAAAGATTCAAACTATTTTCAGAGGCTATTTGGCGCGAAAGGCTCATAGAGCACTAAAAGGATTGGTTAAGATCCAAGCTCTTGTTAGAGGGTTCCTAGTTAGAAAAAGGGTTGCTGCAACACTTCACAGTATGCAAGCTCTAATGAGAGCTCAAGCTGTTGTCCGGTCAAGGCGAGCCCGTAACTCCATCATCGACAAGGAGAACATATATCAGGCAGAAATTCGTGGACGAAAACATGTGCAAATGTTCGATGAAACTAGAAACCGACAACACGATAAATGGCTTCCCAATTCCTCGAGTAGATTTGCTCCGAACCCGAAAGTTGTTCTGGTTGATCCTCACAGGTCTGGTTCGAGATCTGCAATGTCCGAATATGGAGATGATTTGTATGACAGCTATGATGCAACATCTCTTCCTTGTCAAATTCCGCGTCGAATCTCAGTTCATGATTGCCAATATTCTCAAGATTTTGATTGGTGCAACAATAATGTTAACGATGAACGCAGACTCTACACAGCCCATAGCACTCCTCGATTGGTGAATTCTTCGCAAGCTAATACTCTGGTGAAGAGTGTTTCAGAAGACACCAGCTTGTTCATGCCTTACTCAAATTTTCCTAACTACATGGCTAATACTCATTCATCTAAGAGAAGAGTGGTAAGGTCTCACAGTGCTCCAAAGCAAAGACCTGAACTCAAGAAAAGGGTTCCTTTTGATGAAATAATGGCCACAAGAAATAGCATAAGTTGTGTTAGAATGCATTGGTAA 1071 0.4127 MGKASRWLKGLFGMKKEKEHSNKSGPLVLDKKEKKRSGKDDNHIDHQTSAPAFDDAWYKSYVAEKQKQNEHNKNAIFVRSLSHGSGRKSLLFGSREMLAAVKIQTIFRGYLARKAHRALKGLVKIQALVRGFLVRKRVAATLHSMQALMRAQAVVRSRRARNSIIDKENIYQAEIRGRKHVQMFDETRNRQHDKWLPNSSSRFAPNPKVVLVDPHRSGSRSAMSEYGDDLYDSYDATSLPCQIPRRISVHDCQYSQDFDWCNNNVNDERRLYTAHSTPRLVNSSQANTLVKSVSEDTSLFMPYSNFPNYMANTHSSKRRVVRSHSAPKQRPELKKRVPFDEIMATRNSISCVRMHW 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04153 356 Pfam Protein of unknown function (DUF4005) 293 350 IPR025064 -
Mepo6g04153 356 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Mepo6g04153 356 MobiDBLite consensus disorder prediction 10 48 - -
Mepo6g04153 356 SMART iq_5 118 139 IPR000048 GO:0005515
Mepo6g04153 356 SMART iq_5 95 117 IPR000048 GO:0005515
Mepo6g04153 356 Pfam IQ calmodulin-binding motif 99 117 IPR000048 GO:0005515
Mepo6g04153 356 Pfam IQ calmodulin-binding motif 123 137 IPR000048 GO:0005515
Mepo6g04153 356 PANTHER IQ-DOMAIN 5-RELATED 1 333 - -
Mepo6g04153 356 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Mepo6g04153 356 MobiDBLite consensus disorder prediction 1 48 - -
Mepo6g04153 356 Gene3D - 56 121 - -
Mepo6g04153 356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 139 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04153 Mepo-Chr6 53609767 53611762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04153 1 354 IQD Protein Family AT3G16490 38.442 1.48e-59 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04153 - - gmx:100797686 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04153 6 53609767 53611762 Mepo6g04153 6 53609767 53611762 ECH
Mepo6g04153 6 53609767 53611762 Mepo1g04355 1 51183065 51186188 PCT