Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04135 ATGAGAACAACAGCAATTCCAGCAAATGCCAGTGACAACTTGGAATTTTCCTTCCTTCCCAAGTATAGTTCCTCCAGATATTATGTGTACATGTATTTTGCTGAAATCCAGAAGCTCCAGGCAAATCAAATTAGACAGTTCAACATTTTTGTAAATGGGAAGCTTTTAAATAGTGATCCAGCAGTCAATCCTGTGTATCTTCAAAACCTGTATTATTTATCAGTTATAAGTGAAACTAAGTTAGAACTTTGGCTTAATAAAACTAGTAGATCAACTCTTCCACCGCTACTTAATGCCGTCGAGATATATATGGCAAAGGACTTCTTACAATCAAAAACATATCAAACCGATGTTGATGCTATCCTAAATGTGAAGTCAACTTATGGGATCAAGAGAAACTGGCAAGAAGATCCTTGTACTCCAGTCTATTACTTATGGAATGGCCTAAACTGCAGCTATGTTGGTACGGATTCACCAAGGATCATATACTTGAACTTAACTTCCAGCGGTTTAATTGGACCTATAGCTTATGGGATATCCAATCTGAAGTCAATAGAATATTTAAACTTGGAAGGAAATCAGCTAGCAGGATCAATTCCAGTACAACTCCTTGTGCGTTCAGAGAATAGTATGCTCAAATCCAAAAATCCAAATCTTTGCACCTCAGGTTCATGCAACAAGAGGAGTGGGAACAAGGTTTTAGTTCCATTAGTAGCATCACTCGGTGGAGCTTTCATTATACTAGCAGTAGCAATGATTTCTTTTCGCTATACTATAAGAGACACCACGGTAGGTGTGGCTTTCTATTCTATTGAGATTGGTGGAAGCCAAACAATAAGAATAAAAATAGAAGATTTAATTGTTTCACATAATCTGAGCAAGCTGGGTGCTTATTCAAGAATAAAGCAGGAACTTGAGTCAAAGAAACAAGAATTCAGCTATGAAGAAGTATTAAGCATTACCAGAAACTTTGAAAAAGTTCTAGGGAAAGGAGCATCTGGAACAGTCTACCATGGATGGATTGATCATGATACTGAGGTAGCTGTGAAAATGCTATCTTCCTCATCAGCTCAAGGATATCTGCAATTTGAAGCAGAGGCCAAACTTTTTGCTGTAGTACATCATAAATACTTGACGGGTCTTATAGGGTATTGTGATGATGGCACCAACATGGCTCTAATCTATGAGTATATGACTAATGGAGACTTAGCCAAGCACTTATCAGATAAAAACGAAAATATATTGAGTTGGAATCAAAGACTTCAAATTGCTGTGGATGCTGCAGAAGGATTGGAGTATCTGCATCATGGCTGCACTCCACCGATTGTTCACAGAGATGTTGAGTCTAAAAACATCTTACTAAATGAAAAACTTCAGGGTAAACTAGCAGATTTTGGGTTGTCAAAGATCTTTCCTAATGAAGATGACACGCATGTCCGCACGGTTGTTGCTGGCACGCCGGGATACCTCGACCCTGAGTACAATAGATTAAGCAGAGATGTATTCAGTTTTGGGGTAGTTTTGCTGGAGATAATTACAGGAAAACCAGCCATATCCAAAACTGAAGAGAAAGTCCATATTGTTCAATGGGTTGGTTCCATGTTGCTTGAAAAAGATGTAAAAGATACTGTGGATCCAAGATTAGAGGGAGAATTTGATATTTACTCTGGAAAGAAAGCTTTGGATACTGCTATGGCTTGTGTAGCACCCACTTCAATCAATAGGCCAACCATGAATTGTGTAGTTATGGAACTGAAACAATGCTTCGAAAACAAAATCACTCATTCTTCTGACTCTAGTCTCACTCATTCTGTCTCCTTTGATAGAATTAGTTGTGAGAGCTCTCTTGCGAGGTAG 1857 0.384 MRTTAIPANASDNLEFSFLPKYSSSRYYVYMYFAEIQKLQANQIRQFNIFVNGKLLNSDPAVNPVYLQNLYYLSVISETKLELWLNKTSRSTLPPLLNAVEIYMAKDFLQSKTYQTDVDAILNVKSTYGIKRNWQEDPCTPVYYLWNGLNCSYVGTDSPRIIYLNLTSSGLIGPIAYGISNLKSIEYLNLEGNQLAGSIPVQLLVRSENSMLKSKNPNLCTSGSCNKRSGNKVLVPLVASLGGAFIILAVAMISFRYTIRDTTVGVAFYSIEIGGSQTIRIKIEDLIVSHNLSKLGAYSRIKQELESKKQEFSYEEVLSITRNFEKVLGKGASGTVYHGWIDHDTEVAVKMLSSSSAQGYLQFEAEAKLFAVVHHKYLTGLIGYCDDGTNMALIYEYMTNGDLAKHLSDKNENILSWNQRLQIAVDAAEGLEYLHHGCTPPIVHRDVESKNILLNEKLQGKLADFGLSKIFPNEDDTHVRTVVAGTPGYLDPEYNRLSRDVFSFGVVLLEIITGKPAISKTEEKVHIVQWVGSMLLEKDVKDTVDPRLEGEFDIYSGKKALDTAMACVAPTSINRPTMNCVVMELKQCFENKITHSSDSSLTHSVSFDRISCESSLAR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04135 618 Gene3D Ribonuclease Inhibitor 117 230 IPR032675 -
Mepo6g04135 618 SUPERFAMILY Protein kinase-like (PK-like) 307 585 IPR011009 -
Mepo6g04135 618 Gene3D Phosphorylase Kinase; domain 1 303 397 - -
Mepo6g04135 618 PANTHER OS07G0107800 PROTEIN-RELATED 1 589 - -
Mepo6g04135 618 Pfam Protein tyrosine and serine/threonine kinase 324 523 IPR001245 GO:0004672|GO:0006468
Mepo6g04135 618 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 398 598 - -
Mepo6g04135 618 SUPERFAMILY L domain-like 121 202 - -
Mepo6g04135 618 Gene3D Transferase(Phosphotransferase) domain 1 398 611 - -
Mepo6g04135 618 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Mepo6g04135 618 Pfam Malectin-like domain 1 104 IPR024788 -
Mepo6g04135 618 ProSiteProfiles Protein kinase domain profile. 322 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04135 Mepo-Chr6 53474376 53477808 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04135 1 587 Receptor kinase-like Gene Family AT2G19210 44.833 3.41e-170 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mepo6g04135 PK_Tyr_Ser-Thr 2.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04135 - - psat:127087401 937.562