Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04122 ATGAGTCGAGAACAATCGAAGAGAGGGAAGCATGAGAAAGGTTCTGATGGTGCTGGAAAGGTTATTGTTGCTGTCAAGGCATCAAAGGAAATTCCAAAGAGTGCTCTTGTTTGGTCTCTAACTCATGTTGTTCAACCTGGTGATTGCATTACATTGCTTGTGGTTGTACCTTCACAAAGTTCAGGCCGAAAATTATGGGGTTTTCCGAGGTTTGCTGGTGACTGTGCTAATGGACACAAGAAGTCAACAATGCTGGGAGCTAGTTCAGAGCACAAAAATGATATAACTGATTCTTGCTCTCAAATGATCCTTCAGCTCCATGATGTCTATGATCCAAAGAAGATAAATGTCAGGATTAAAATTGTTTCTGGATCACCTTGTGGAGCAGTGGCCGCAGAAGCCAAGAAAGCCCAAGCCAATTGGGTCGTATTAGATAAACAGCTCAAGCATGAGGAAAAACAATGCATGGAAGAGCTGCAGTGCAACATTGCGGTTATGAAAGGTTCCCAAGCTAAGGTACTTCGCTTGAATTTGGTTGGATCACAAAAGAAGGATCTTGAAGAAACATGTCCATTATCTTCCGAAAAGCATGTGATGCCTGGAAAACAATCAAAGAAGAAAAACAGTTCTTTGAATTCCACCACAACAGGACAAGTTGTGACGCCAACTAGCAGCCCCGAGCTAGAGACATCATTTACTACAACTGAAGTTGGAACTTCATCGGTTTCAAGCTCTGATCCTGGAACATCACCGTTTTTCGCCTCTGAGAACATTGTCGAGTCAAAGAAAGAGGAAACTATCAACGAAAATCAGGAAACTGATGATATCATTTCTGACACAGACAGTGAAAATTTGTCCGCTTCTTCAGCAAGCTTGAGGTTTCAGCCGTGGATTGCAGATTTATTTTTACATAAACAATCATCTCAACGTGAAGACGAAAGATCGGACTCAGAGAGATCTTGTGATAGGCTTCAAATGTCTACAACTAGAGCTTTGCTAGAAAAATTCTCGAGGCTTGACAGAGAAGCTGAAATTGAAACCTCAACCTATAAGACTAACATGGAATTCAGTGGAAGCGTAAGAGAAGCGGTAGCGTTATCTAGAAACGCCGCACCTGGCCCACCACCATTATGTTCAATATGTCAACACAAAGCTCCTGTTTTTGGAAAACCTCCAAGATGGTTCAGCTATGCTGAGTTGGAGCTAGCCACTGGTGGATTTTCACCAGCCAACTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGAATTCTACCAGAAGGGCAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCGCAGGGTGATCATGAATTCTGCTCAGAGGTAGAAGTCCTGAGTTGTGCACAGCACCGGAATGTTGTTATGTTGATTGGCTTCTGTATTGAGGATAAGAGAAGGCTGCTGGTTTATGAATATATATGCAATGGATCATTGGACACTCATTTATATGGGAGACAACGGAAACCATTAGAATGGTCAGCTCGTCAGAAAATTGCTGTCGGGGCTGCCCGAGGATTGCGATATCTTCATGAAGAGTGCAGAGTGGGATGCATTGTTCACCGTGACATGCGGCCTAACAACATTCTTATCACTCATGATTTTGAACCACTGGTTGGTGATTTTGGACTTGCAAGGTGGCAGCCTGATGGAGACACTGGAGAGGAGACTAGAGTTATTGGAACATTTGGGTATTTAGCTCCCGAATATACTCAAAGTGGACAAATAACTGAAAAGGCTGATGTTTATTCCTTTGGAGTGGTATTAGTGGAACTTGTGACAGGGCGCAAAGCTGTGGATATCAACCGGCCCAAAGGACAGCAGTGTCTTACCGAGTGGGCACGACCACTGTTAGAAGAGTACGCCATTGAGGAACTGATTGATCCGAGGTTGGGAAGTCACTATTCAGAACATGAGGTCTCTTGCATGATACATGCGGCATCCTTATGCATAAGGCGAGATCCTTATTCTAGACCACGTATGTCACAGGTTTTGCGAATACTAGAAGGTGACACGGTCGTGGAATCGCCACGCCATTGCGGTGATTCTCCTTCCCTTTGA 2088 0.4387 MSREQSKRGKHEKGSDGAGKVIVAVKASKEIPKSALVWSLTHVVQPGDCITLLVVVPSQSSGRKLWGFPRFAGDCANGHKKSTMLGASSEHKNDITDSCSQMILQLHDVYDPKKINVRIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKQCMEELQCNIAVMKGSQAKVLRLNLVGSQKKDLEETCPLSSEKHVMPGKQSKKKNSSLNSTTTGQVVTPTSSPELETSFTTTEVGTSSVSSSDPGTSPFFASENIVESKKEETINENQETDDIISDTDSENLSASSASLRFQPWIADLFLHKQSSQREDERSDSERSCDRLQMSTTRALLEKFSRLDREAEIETSTYKTNMEFSGSVREAVALSRNAAPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSPANFLAEGGFGSVHRGILPEGQVIAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDTHLYGRQRKPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGEETRVIGTFGYLAPEYTQSGQITEKADVYSFGVVLVELVTGRKAVDINRPKGQQCLTEWARPLLEEYAIEELIDPRLGSHYSEHEVSCMIHAASLCIRRDPYSRPRMSQVLRILEGDTVVESPRHCGDSPSL 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04122 695 Gene3D Transferase(Phosphotransferase) domain 1 483 689 - -
Mepo6g04122 695 SUPERFAMILY Protein kinase-like (PK-like) 391 679 IPR011009 -
Mepo6g04122 695 PANTHER OS01G0750732 PROTEIN 155 682 - -
Mepo6g04122 695 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 483 686 - -
Mepo6g04122 695 ProSiteProfiles Protein kinase domain profile. 407 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04122 695 FunFam Dual-specific kinase DSK1-like 12 167 - -
Mepo6g04122 695 MobiDBLite consensus disorder prediction 189 252 - -
Mepo6g04122 695 ProSitePatterns Tyrosine protein kinases specific active-site signature. 528 540 IPR008266 GO:0004672|GO:0006468
Mepo6g04122 695 CDD STKc_IRAK 413 679 - -
Mepo6g04122 695 Pfam Protein kinase domain 413 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04122 695 MobiDBLite consensus disorder prediction 204 252 - -
Mepo6g04122 695 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 379 482 - -
Mepo6g04122 695 Gene3D Phosphorylase Kinase; domain 1 379 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04122 Mepo-Chr6 53360520 53364642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04122 387 680 Trihelix Transcription Factor Family AT1G70460 52.824 1.55e-98 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mepo6g04122 Pkinase 1.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04122 - - gmx:100789216 1165.98