Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04118 ATGGATAAGCTCATTCATGGAACAATTGAGGCTACCATCTTCAACGCAACTCCTTACTCTCCTTCATTTCCCTTCAATTGTTTATTTGTAAATGGAAAGCCTGCTTATGTGACAATCAAGATAGACAACAAGAAAGTGGCAAAAACAACACAAGAAAGTGAACGTGTTTGGAACCAAACATTTCAGATTCAGTGTGCTCATCTAGCTGATTCAACCATCACTATTACACTGAAAACAAAATGTACCATATTAGGAAAATTCCACATCAAGGCACAACAGTTGAAGGAAGACAGTTTGATCAATGGATCCTTCCCTCTCCTAATGGAAAATGGTAAACCAAATCAAGAACTAAAATTAAGATTTATATTATGGTTCAAGCCAGCAAATTTGGAACCAATTTGGACAAAACTACTAAGTAGTGAAGAGTTTCAAGGGCTAAGGGATGCTACATTTCCACAAAGGTCTAATTGTCATGTTAAGCTCTATCATGATGCTCATCATTCACCTACTTTCCAACCTCCTTTTGATAATTGTGGAGTTCCTAGAAAGTTATGGGAGGATGTTTATAAAGCTATTGAGGGTGCAAAATATTTAGTATATATTGCAGGCTGGTCTTTCAATCCGAAGATGGTCCTGGTTAGAGATCCTCAAACAGAAATCCCACATGCCAGAGAAATAACGTTGGGTGAGCTATTAAAGAAGAAAGCAGAAGAAGGAGTGGCTATAAGGGTTATGATTTGGGATGATGAAACATCATTTCCATTTATCAAGAACAAAGGTGTGATGAACACACATGATGAGGAAGCTTTTGCTTACTTTAAACACACAAAAGTAGTATGCAGAAGGTGTCCTAGATTACATGACAAATTCCCTACAATCTTTGCTCATCATCAAAAAACCATAACTGTGGATACCAAAGCTCCTAACTCTGTCAATGACAGAGAAATTATGAGCTTTTTGGGTGGTTTAGATTTGTGTGACGGTCGATATGATACTGAGAAACATTCTTTGTTCGAGACACTTACTCAGGAATCACATTACCATGATTTCTACCAGACAAACATTGCAGGAGCTAGCCTCAACAAAGGAGGTCCAAGAGAGCCTTGGCATGATGCACATGCTTGTGTTACCGGCGAGGCAGCTTGGGATGTTTTAACCAATTTTGAACAAAGATGGACAAAGCAATGTGATTCTTCTCTTCTAGTCCCTGCAAACACCTTAGAAAATCTCATTCCTATTTCCTCAACAAGCACTTCTATGGAAAGGAATTGGAAAGTGCAAGTATATCGGTCGATCGACCATGTCTCGGCTAGCCAACTGTTTAGAAAGCTAACAGTTGAGAGTAGCATCCATGAAGCTTACGTCGAAGCAATAAGGCGTGCCGATAGGTTTGTGTACATTGAAAACCAATATTTCATTGGAGGGTGCCATTTGTGGCAGAAAGATAAGAACAGTGGCTGCACAAATTTGATTCCAATTGAGATTGCACTCAAGGTGGTCAACAAGATTAAAGCAAGAGAAAGGTTTGCAGTGTATATAGTCATACCAATGTGGCCAGAAGGAGTGCCTGAAAGTGAACCAGTTCAAGATATACTGCATTGGACAAGAGAAACAATGACAATGATGTATAAGTTGATTGGAGAAGCAATCATAGAAAGTGGTGAGCCAGGACATCCAAGAGATTACTTAAATTTCTTTTGCCTTGCAAATAGAGAAAAGAAGGAAAATGAGGAATATCATCCTCCACATTCTCCTCTTCCTGATACTCAATACTGGAGTGCACAGAAAAATAGAAGATTCATGGTTTATGTTCACTCCAAGCTCATGATAGTGGATGACCTATATATACTAATAGGATCAGCAAATGTAAACCAAAGATCGATGGACGGGCAAAGGGACACAGAAATTGCGATTGGAGGCTACCAGTCTCATCAAGACGGCGTTGGTTATCCCATAAGCAAAGGTGACATTCATGAATACAGAATGTCAATGTGGTATGAACACACTGGTAGAGCTGAGAAGTTGTTTTTAGAGCCAGAAAGTTTAGAATGTGTGCAGAGAATGTGCTCAATAGGAGATAAAATGTGGAAAATCTATAGTAGTGAAGAAATTGTGGACATGGAGGGTGTCCACCTAGTAACTTACCCTATGATAGTAACACAAGATGGTTCTGTGGAGAATTTAACTAATGGTGAGGATCATTTTCCTGATACAAGAGCTCTAGTAAAAGGAACAAGATCAAAATTATTACCCTCTGTCATTACCACCTAG 2271 0.3901 MDKLIHGTIEATIFNATPYSPSFPFNCLFVNGKPAYVTIKIDNKKVAKTTQESERVWNQTFQIQCAHLADSTITITLKTKCTILGKFHIKAQQLKEDSLINGSFPLLMENGKPNQELKLRFILWFKPANLEPIWTKLLSSEEFQGLRDATFPQRSNCHVKLYHDAHHSPTFQPPFDNCGVPRKLWEDVYKAIEGAKYLVYIAGWSFNPKMVLVRDPQTEIPHAREITLGELLKKKAEEGVAIRVMIWDDETSFPFIKNKGVMNTHDEEAFAYFKHTKVVCRRCPRLHDKFPTIFAHHQKTITVDTKAPNSVNDREIMSFLGGLDLCDGRYDTEKHSLFETLTQESHYHDFYQTNIAGASLNKGGPREPWHDAHACVTGEAAWDVLTNFEQRWTKQCDSSLLVPANTLENLIPISSTSTSMERNWKVQVYRSIDHVSASQLFRKLTVESSIHEAYVEAIRRADRFVYIENQYFIGGCHLWQKDKNSGCTNLIPIEIALKVVNKIKARERFAVYIVIPMWPEGVPESEPVQDILHWTRETMTMMYKLIGEAIIESGEPGHPRDYLNFFCLANREKKENEEYHPPHSPLPDTQYWSAQKNRRFMVYVHSKLMIVDDLYILIGSANVNQRSMDGQRDTEIAIGGYQSHQDGVGYPISKGDIHEYRMSMWYEHTGRAEKLFLEPESLECVQRMCSIGDKMWKIYSSEEIVDMEGVHLVTYPMIVTQDGSVENLTNGEDHFPDTRALVKGTRSKLLPSVITT 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04118 756 Pfam Phospholipase D C terminal 673 745 IPR024632 -
Mepo6g04118 756 Pfam Phospholipase D Active site motif 603 627 IPR001736 GO:0003824
Mepo6g04118 756 Pfam Phospholipase D Active site motif 293 329 IPR001736 GO:0003824
Mepo6g04118 756 Gene3D Endonuclease Chain A 442 646 - -
Mepo6g04118 756 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 600 627 IPR001736 GO:0003824
Mepo6g04118 756 PIRSF PLD_plant 5 756 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mepo6g04118 756 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 292 329 IPR001736 GO:0003824
Mepo6g04118 756 Pfam C2 domain 35 106 IPR000008 -
Mepo6g04118 756 SMART pld_4 292 329 IPR001736 GO:0003824
Mepo6g04118 756 SMART pld_4 600 627 IPR001736 GO:0003824
Mepo6g04118 756 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 121 IPR035892 -
Mepo6g04118 756 SUPERFAMILY Phospholipase D/nuclease 143 403 - -
Mepo6g04118 756 Gene3D Endonuclease Chain A 170 422 - -
Mepo6g04118 756 SUPERFAMILY Phospholipase D/nuclease 418 685 - -
Mepo6g04118 756 Gene3D C2 domain 30 131 IPR035892 -
Mepo6g04118 756 PANTHER PHOSPHOLIPASE D 33 740 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04118 Mepo-Chr6 53340575 53344260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04118 27 756 Phospholipase D Gene Family (Wang group) AT1G55180 62.366 0.0 969
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04118 K01115 - gmx:100807431 1333.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04118 6 53340575 53344260 Mepo6g04118 6 53340575 53344260 ECH
Mepo6g04118 6 53340575 53344260 Mepo1g04288 1 50288771 50294666 PCT