Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04111 ATGGCACTGCAGAGTAGCTTATCCATAGATGATGTGAAACATGATGAATATGATGATGATGGTCACATAAAACCAACAGGATCTGGAGTGTTGTCATTGGTATCGGCTATTACAAAATTCATCTTTTTTAAAGATGTCGTGCGACGATCCACAGGATCTAGAATAGAAGATGAAACTATTACTTTGGATTTCGTAAAGAAAATGATGGATGATTTCAAGAATCCGAAGTGCTTGCATAGACGGTATGCATACAAGATTGTATTGCAAACAAAAAAGATTTTAAAGGCTTTGCCTTCTCTTGTCGACATAACTGTTCCTCATGGGAAACGTATTACTGTTTGTGGCGATGTGCATGGTCAGTTCTATGATCTTTTGAATATTTTTGAGCTCAATGGACTTCCTTCAGAAGAAAATCCATATCTATTTAATGGTGACTTTGTGGATAGAGGATCGTTTTCTTTAGAAGTCATCCTCACTTTGTTTGCATTTAAGTGCATGTCTCCATCAGCCATATATCTAGGTAGAGGAAATCATGAGAGCAAGAGAATGAACAAGAAATGTGGTTTTGAGGGTGAGGTGCGCTCAAAGTTGAATGCAGGATTTGTCAAACTATTTGCGGAAGTGTTCTGCTGTTTACCTTTGGCTCATGTGATAAACAAGAAAGTTTTCGTCGTCCATGGAGGTCTTTTTAGTGTTGATGGGGTCAAACTCTCTCATATCCGATCGATCAATAGGTTTTGTGAGCCTCCTGATGAAGGGTTGATGTGTGACTTGCTATGGAGTGATCCACAATATCTCCCTGGAAGAGGACCAAGCAGGCGTGGTGATGAATTCTTTTGTTTTGGCGAGGATGTTACGAAAAGGTTCTTGAAGGATAATAATTTAGATTTAGTTGTGCGATCTCATGAATCAAAGCGCAAGGGTTATGAGATTCAACATGACGGTAAACTCATAACTGTATTTTCTGCTCCAAATTACTGTGATCAGATGGGTAACAGAGGTGCCTTTATTCGATTTGAAGCGCCTGATTTGAAACCTAAAATAATTACATTTGAAGCAGTGCCACACCCTGATGTTAAGTCAATGGCTTATGCAAACAACTTCTACCGATGGTTCTAA 1119 0.3896 MALQSSLSIDDVKHDEYDDDGHIKPTGSGVLSLVSAITKFIFFKDVVRRSTGSRIEDETITLDFVKKMMDDFKNPKCLHRRYAYKIVLQTKKILKALPSLVDITVPHGKRITVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEVILTLFAFKCMSPSAIYLGRGNHESKRMNKKCGFEGEVRSKLNAGFVKLFAEVFCCLPLAHVINKKVFVVHGGLFSVDGVKLSHIRSINRFCEPPDEGLMCDLLWSDPQYLPGRGPSRRGDEFFCFGEDVTKRFLKDNNLDLVVRSHESKRKGYEIQHDGKLITVFSAPNYCDQMGNRGAFIRFEAPDLKPKIITFEAVPHPDVKSMAYANNFYRWF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04111 372 PIRSF PPPtase_5 2 372 - -
Mepo6g04111 372 PRINTS Serine/threonine phosphatase family signature 237 264 IPR006186 GO:0016787
Mepo6g04111 372 PRINTS Serine/threonine phosphatase family signature 140 167 IPR006186 GO:0016787
Mepo6g04111 372 PRINTS Serine/threonine phosphatase family signature 173 197 IPR006186 GO:0016787
Mepo6g04111 372 PRINTS Serine/threonine phosphatase family signature 294 314 IPR006186 GO:0016787
Mepo6g04111 372 PRINTS Serine/threonine phosphatase family signature 207 233 IPR006186 GO:0016787
Mepo6g04111 372 PRINTS Serine/threonine phosphatase family signature 316 332 IPR006186 GO:0016787
Mepo6g04111 372 PRINTS Serine/threonine phosphatase family signature 110 137 IPR006186 GO:0016787
Mepo6g04111 372 SMART pp2a_7 78 355 IPR006186 GO:0016787
Mepo6g04111 372 FunFam Serine/threonine-protein phosphatase 5 32 372 - -
Mepo6g04111 372 Pfam Calcineurin-like phosphoesterase 110 303 IPR004843 GO:0016787
Mepo6g04111 372 Pfam PPP5 TPR repeat region 48 102 IPR013235 -
Mepo6g04111 372 Gene3D - 35 372 IPR029052 -
Mepo6g04111 372 SUPERFAMILY Metallo-dependent phosphatases 52 367 IPR029052 -
Mepo6g04111 372 CDD MPP_PP5_C 51 366 IPR041753 -
Mepo6g04111 372 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 49 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04111 Mepo-Chr6 53281277 53284369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04111 59 300 Calmodulin-binding Proteins AT5G63870 31.119 5.95e-34 125