Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04110 ATGATTGTAATAGGATCTGGAGTGTTGTCATTGGCATTGGCTATTGCTCATTCGCGCTGGATTAAAGATAAGAAAGGGAGGAAACATACAAAGAGTACAAGTACAAGAAGTATCACGGTCCAAGACCATCACAAAACAAAAATAAAACAACCAAAAGCAAGGACAAAAAGCAACATGGAAAAGACAACAAGCCAAGAACAGCCTAACTCCAGCACTTATGTCGAGCCACGATATTCGGGATCAAGAATAGAAGGAGACACTATTACTTTGGATTTCGTAAAGAAAATGATGAATGATTTCAAGGAACAGAAGTGCTTGGATAGAGGGTATGCATCCAAGATTTTGTTGCAAACAAAAAAGATTTTGAAAGCTTTGCCTTCTCTTGTCGACATAACTGTTCCTCATGGAAAACATGTTACTGTTTGTGGCGATGTGCATGGTCAGTTCTATGATCTTTTGAATATTTTTGAGCTCAATGGGCTTCCTTCAGAAGAAAATCCATATCTATTTAATGGTGACTTTGTAGATAGAGGATCGTTTTCAGTGGAAGTCGCATTCACTTTGTTTGCATTTAAGTGCATGTCTCCATCTGCTATGTATATAGCTAGAGGAAATCATGAGAGCAAGAGCATGAACAAGATATTTGGTTTTGAGGGTGAGGTGCGCGCAAAGTTGAATGACAAATTTGTCAAAATGTTTGCGGAAGTATTCAACTGTTTACCTTTGGCTCATGTGATAAACAAGAAAGTTTTCGTCGTCCATGGAGGTCTTTTTAGTGTTGATGGGGTCAAACTCTCTCAAATCCGATCAATTAATCGGTTCTGTGAGCCTCCTGATGAAGGGTTGATGCATGACTTGCTATGGAGTGATCCACAACCTCTCCCTGGAAGAGGACCAAGCAAGCGTGGCAGTGGATGCTTTTGTTTTGGTGAGGATGTTACAAAAAGATTCTTGAGGGATAATAATTTAGATTTAGTTGTGAGATCTCATAAATCAATGCACAAGGGTTATGAGATTCAACATGACGGTAAACTCATAACTGTATTTTCTGCTCCAAATTACTGTGATAAGAAGGGTAACAAAGGTGCCTTTATTCGATTTGAAGCACCTGATTTGAAACCTAACATTATTACATTTGAAGCAGTGCCACACCCTGATGTTAAGCCAATGGCTTATGCAAAAAACTTCGACCGGTTGTTCTCATAA 1206 0.3897 MIVIGSGVLSLALAIAHSRWIKDKKGRKHTKSTSTRSITVQDHHKTKIKQPKARTKSNMEKTTSQEQPNSSTYVEPRYSGSRIEGDTITLDFVKKMMNDFKEQKCLDRGYASKILLQTKKILKALPSLVDITVPHGKHVTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSVEVAFTLFAFKCMSPSAMYIARGNHESKSMNKIFGFEGEVRAKLNDKFVKMFAEVFNCLPLAHVINKKVFVVHGGLFSVDGVKLSQIRSINRFCEPPDEGLMHDLLWSDPQPLPGRGPSKRGSGCFCFGEDVTKRFLRDNNLDLVVRSHKSMHKGYEIQHDGKLITVFSAPNYCDKKGNKGAFIRFEAPDLKPNIITFEAVPHPDVKPMAYAKNFDRLFS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04110 401 PIRSF PPPtase_5 16 401 - -
Mepo6g04110 401 MobiDBLite consensus disorder prediction 22 78 - -
Mepo6g04110 401 SMART pp2a_7 106 383 IPR006186 GO:0016787
Mepo6g04110 401 MobiDBLite consensus disorder prediction 57 77 - -
Mepo6g04110 401 SUPERFAMILY Metallo-dependent phosphatases 86 393 IPR029052 -
Mepo6g04110 401 Pfam PPP5 TPR repeat region 60 130 IPR013235 -
Mepo6g04110 401 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 23 394 - -
Mepo6g04110 401 Gene3D - 51 400 IPR029052 -
Mepo6g04110 401 PRINTS Serine/threonine phosphatase family signature 168 195 IPR006186 GO:0016787
Mepo6g04110 401 PRINTS Serine/threonine phosphatase family signature 235 261 IPR006186 GO:0016787
Mepo6g04110 401 PRINTS Serine/threonine phosphatase family signature 138 165 IPR006186 GO:0016787
Mepo6g04110 401 PRINTS Serine/threonine phosphatase family signature 265 292 IPR006186 GO:0016787
Mepo6g04110 401 PRINTS Serine/threonine phosphatase family signature 344 360 IPR006186 GO:0016787
Mepo6g04110 401 PRINTS Serine/threonine phosphatase family signature 201 225 IPR006186 GO:0016787
Mepo6g04110 401 PRINTS Serine/threonine phosphatase family signature 322 342 IPR006186 GO:0016787
Mepo6g04110 401 Pfam Calcineurin-like phosphoesterase 138 330 IPR004843 GO:0016787
Mepo6g04110 401 CDD MPP_PP5_C 78 394 IPR041753 -
Mepo6g04110 401 FunFam Serine/threonine-protein phosphatase 5 57 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04110 Mepo-Chr6 53272682 53277047 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04110 84 323 Calmodulin-binding Proteins AT5G63870 30.986 1.28e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04110 K04460 - gmx:100820099 559.296