Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04102 ATGGCTACCAACATAGCAGAAAGAGTGCAATATCCATTAGACTCTTCCTCCTATAAAATCGTCGACGAGATTGGTGCCGGTAACAGTGCCGTCGTCTACAAAGCAATCTGCATCCCTATAAACTCCACACCAGTAGCTATCAAATCCATAGACTTGGATCGTTCGCGCCCCGACCTAGACGATGTTAGACGTGAAGCAAAAACATTATCACTTCTTTCCCACCCCAACATCCTCAAAGCTCACTGTTCTTTCACAGTTGACAACCGTCTTTGGGTGGTTATGCCATTCATGGCTGGTGGTTCATTACAATCCATAATCTCTCACTCTTTCCAAAACGGCTTAACAGAACAATCCATAGCTGTTATTCTCAAAGACACTCTCAATGCTCTTTCTTACCTTCATGGACAGGGACACCTTCATAGAGATATCAAATCTGGTAACATCCTTGTTGACTCAAATGGGCTGGTTAAACTTGCAGATTTTGGTGTTTCTGCTTCCATTTATGAGTCAAATAACTCTGTAGGAGCATGTTCTTCTTATTCATCTTCGTCTTCGAATTCTTCTTCTTCTCATATATTTACTGATTTTGCTGGAACACCTTATTGGATGGCTCCTGAAGTTATTCACTCTCATAATGGTTACAGTTTCAAAGCTGATATATGGTCTTTTGGGATAACAGCTTTGGAGTTAGCACATGGAAGACCACCACTTTCTCATCTTCCTCCTTCTAAGTCTTTGATGCTAAATATTACAAAGAGGTTTAAGTTTTCTGATTTTGATAAACATAGTTACAAGGGTCATGGTGGTAGTAACAAATTCTCTAAGGCTTTTAAGGACATGGTTGCTTTATGTTTGAATCAAGATCCTACAAAAAGACCCTCTGCTGAGAAGTTGCTTAAGCATTCATTCTTTAAAAACTGCAAAGGATCAGAGTTTTTGGTGAAGAATGTGTTGAATGGATTGCCTAGTGTTGAAAAAAGGTATAAAGAGATCAAAGCTATAACGGATCCAGATTCAAAGTGCAAGGATGGTGGCGACGACGACGATGAGGAGTCAGTGAAAAATGTGAAACAGAGAAGAATCAGTGGCTGGAATTTCAATGAAGATGGATTGGAACTTGTGCCTGTATTCCCAAAGGATCAAAGCAGAGATGATGAAGTTGTGAAACAAGTTCGGTTTGAAGAAGAAAAGGTGATCCAAGAGGATGCTGTTGTTTCAGCATCAGGAACTGTGATGGAGCCAAAGACCAATGCTTCTGATGTGGCTGATCATGAAAATGTTGGTGGCGTTGGGAAGAACCACGAAGCTACGTTGGCAACGCTGAATGTGTTGAAAGAGAGCTTGGAGCAAGAGTTGGGACAAGTCAAGTTTCTGATGAATCTAATTGGTGGAGAGGAGATTCATGTGGCTGATAGTGATGAGAAAATGGTGCAGGAGATCTCTAAGTTGAGGACAGACTTGGAAAATGAGAGGAAGAAGAACTTGCAGATGGAGATGCAGCTGGAGAATATCAAGCTTCACCTAATTTCTTCTGCTGTTAATAGTCCTACTAGTTAA 1557 0.4085 MATNIAERVQYPLDSSSYKIVDEIGAGNSAVVYKAICIPINSTPVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVDNRLWVVMPFMAGGSLQSIISHSFQNGLTEQSIAVILKDTLNALSYLHGQGHLHRDIKSGNILVDSNGLVKLADFGVSASIYESNNSVGACSSYSSSSSNSSSSHIFTDFAGTPYWMAPEVIHSHNGYSFKADIWSFGITALELAHGRPPLSHLPPSKSLMLNITKRFKFSDFDKHSYKGHGGSNKFSKAFKDMVALCLNQDPTKRPSAEKLLKHSFFKNCKGSEFLVKNVLNGLPSVEKRYKEIKAITDPDSKCKDGGDDDDEESVKNVKQRRISGWNFNEDGLELVPVFPKDQSRDDEVVKQVRFEEEKVIQEDAVVSASGTVMEPKTNASDVADHENVGGVGKNHEATLATLNVLKESLEQELGQVKFLMNLIGGEEIHVADSDEKMVQEISKLRTDLENERKKNLQMEMQLENIKLHLISSAVNSPTS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04102 518 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 10 448 IPR047173 GO:0043539
Mepo6g04102 518 Gene3D Transferase(Phosphotransferase) domain 1 100 351 - -
Mepo6g04102 518 Coils Coil 480 507 - -
Mepo6g04102 518 Gene3D Phosphorylase Kinase; domain 1 6 96 - -
Mepo6g04102 518 Coils Coil 431 451 - -
Mepo6g04102 518 SMART serkin_6 18 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04102 518 ProSiteProfiles Protein kinase domain profile. 18 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04102 518 SUPERFAMILY Protein kinase-like (PK-like) 15 308 IPR011009 -
Mepo6g04102 518 FunFam Serine/threonine-protein kinase BLUS1 7 96 - -
Mepo6g04102 518 ProSitePatterns Protein kinases ATP-binding region signature. 24 48 IPR017441 GO:0005524
Mepo6g04102 518 Pfam Protein kinase domain 18 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04102 Mepo-Chr6 53211920 53213675 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04102 1 496 MAP Kinase Kinase Kinase Kinase AT4G14480 55.131 2.03e-175 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Mepo6g04102 Pkinase 1.6e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04102 K08835 - gmx:100820227 635.95