Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04101 ATGAACAACAACAACAACAACAACAACATCATCTCAAGAAACGGCAACGGAACAACACAAGCTTGTGCTGCATGTAAATATCAACGTAGGAAGTGTGGTACATCCTGCATTCTCGCACCATATTTTCCTCACGATCGTCAAAAACAATTCTTAAACGCTCATAAATTGTTTGGTGTTGGTAAAATCACCAACATGATCAAGAATGTTCCACCTCATCTTAGAGATCATACTATGAGTTCTATTATTTTTCAATCTGATATGCGTGCTATGGATCCTGTTGGTGGTTGTTATAGATTCATTCAACAGCTTCAATCTCAATATGAATTTTATCAAGCTGAGCTTCATCTTACACGTCAACACCTTGCTATTTGTAGAGCTACACAATCACAACAGCAACAACATCTTGCTGCTGTTAACCATCATTATAATGACATGCATGACGTCATTAATCATAACGATAATGGTCATAATGATGCTGCTTTGAATATTATTAATCATTTTAATCAGCAGCACTTTGTTGACGATCAATTGAATATGAATATGCTGCCTCAACAGCAACTGCACTTGCAGCAACAATATGTTGTTGATGATATCGGTATTAACCCTAATTATGTTCCTTTACAAGAGGATCTTAATACATGGGCGAACAATATTAATATACCGTTGTCGCCGTTGACATTGGAGGGTAACAATAAGGAGGAAGATGGTGAAGAAGATCAAGAACGTGTTGGTGATGATCAAGGAAGTGATCAGAAACCCGTTTTTGACCTAATCAATGAAATGAATTCTTTGGATACCAACAGCAGAAGTAGTATTGATCCGGGACACCAGTGA 834 0.3729 MNNNNNNNNIISRNGNGTTQACAACKYQRRKCGTSCILAPYFPHDRQKQFLNAHKLFGVGKITNMIKNVPPHLRDHTMSSIIFQSDMRAMDPVGGCYRFIQQLQSQYEFYQAELHLTRQHLAICRATQSQQQQHLAAVNHHYNDMHDVINHNDNGHNDAALNIINHFNQQHFVDDQLNMNMLPQQQLHLQQQYVVDDIGINPNYVPLQEDLNTWANNINIPLSPLTLEGNNKEEDGEEDQERVGDDQGSDQKPVFDLINEMNSLDTNSRSSIDPGHQ 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04101 277 Coils Coil 100 120 - -
Mepo6g04101 277 MobiDBLite consensus disorder prediction 224 277 - -
Mepo6g04101 277 MobiDBLite consensus disorder prediction 260 277 - -
Mepo6g04101 277 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 19 150 - -
Mepo6g04101 277 Pfam Lateral organ boundaries (LOB) domain 21 118 IPR004883 -
Mepo6g04101 277 ProSiteProfiles LOB domain profile. 20 121 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04101 Mepo-Chr6 53209863 53211376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04101 20 212 AS2 family AT3G13850 42.157 6.45e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo6g04101 LOB 8.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04101 - - mtr:11423276 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04101 6 53209863 53211376 Mepo1g04265 1 49991952 49993264 PCT