Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04085 ATGGGTGCTTCTGGAAAATGGTTTAAATCACTTCTTTCCAATAACAAAACCGATCAAGAGAAGAAGTGTAGTAGTACTAAGAAGAAATGGAAGCTATGGAAAACAACTTCTTCTTCTTCAACCATGAAGAAGAGTGGTGGTGCTGCTTCTGTGTCTGATTCTTCCATTACCGATACTGCTGCTGCCGTTGCTGTCGTTGTTCGAGCTGCTCCTAAAGATTTCATTCTTATCAGGCAGGAATGGGCAGCTATTCGCATTCAGGCTCTCTTTCGAGCCTTTTTGGCTAGAAGAGCTTTGAGAGCATTGAGAGCAGTGGTGAGGCTGCAAGCAATATTTAGAGGCAGGCAAGTGAGAAAACAAGCAGCTGTTACTCTAAGGTGCATGCAAGCTCTGGTTAGAGTTCAGGCACGTGTAAGAGCTAGGAATGTGAGGAAATCTCCAGAAGGCAAAGCAGTTCAGCAGCTATTAGATGACCATCGCAACCAAGCTGATTCTTCTAAGCTTGTAGAGCAAGGATGGTGTAAAATTCCTGGAACTGCAGATGAAGTTAAAGCAAAGCTAAAAATGAGGCAAGAAGGTGCCATCAAGAGGGATAGAGCAATGGCATACTCTCTATCCACACAGTCAAGAATAAGTGCTAGTCCAAACTCAAAATCCACAAAATCAGTGTCTCTTTTCAAGCATCATCACAACCTTGACAACAAGAGCTTAGGAAATAGTTTGTTAGAGCGCTGGATGGCAAACAAACCATGTCCATGGGATAGTCCAATCTCAAGCAGGAAGAGTGAAGAACTTGTTCCTACTTTTCAATCTAGAAGGAATGGTGTGACAACTAGGATTTCAGCTCTTAAAATCTGTCAGCAAACTCCATCATCTTCGACTTTAAGCTCCGAATACATGAATGATGATAGCATTTTATCAACTTCATGTACATCTGGATCTCCATCTATGCCAGAAGCAACAGAGGAAAAAGATGCTCACCTACCTAGCTACATGAATTTGACAGAATCAACTAAGGCTAAGCTCAAAACTTACAGGTCTTCTTCGCAGAGTTCGAAGAGACTCGTAATGGATGATTGTATGTCTCATAACACAAGTACAACTTTTCTGAATGGAGATAATAGTATAAACAGTTCTGGTTCTGACCCTTCAGTTAATTTATGGAAGGATCGTTGTGCAACACCTCTAAGGGCAAGTTATTATCAAAAACGATATGGCAGGAGATAG 1227 0.4156 MGASGKWFKSLLSNNKTDQEKKCSSTKKKWKLWKTTSSSSTMKKSGGAASVSDSSITDTAAAVAVVVRAAPKDFILIRQEWAAIRIQALFRAFLARRALRALRAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQARVRARNVRKSPEGKAVQQLLDDHRNQADSSKLVEQGWCKIPGTADEVKAKLKMRQEGAIKRDRAMAYSLSTQSRISASPNSKSTKSVSLFKHHHNLDNKSLGNSLLERWMANKPCPWDSPISSRKSEELVPTFQSRRNGVTTRISALKICQQTPSSSTLSSEYMNDDSILSTSCTSGSPSMPEATEEKDAHLPSYMNLTESTKAKLKTYRSSSQSSKRLVMDDCMSHNTSTTFLNGDNSINSSGSDPSVNLWKDRCATPLRASYYQKRYGRR 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04085 408 Gene3D - 76 127 - -
Mepo6g04085 408 Pfam IQ calmodulin-binding motif 81 100 IPR000048 GO:0005515
Mepo6g04085 408 Pfam IQ calmodulin-binding motif 103 120 IPR000048 GO:0005515
Mepo6g04085 408 ProSiteProfiles IQ motif profile. 103 130 IPR000048 GO:0005515
Mepo6g04085 408 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 121 IPR027417 -
Mepo6g04085 408 PANTHER IQ-DOMAIN 5-RELATED 1 370 - -
Mepo6g04085 408 ProSiteProfiles IQ motif profile. 79 107 IPR000048 GO:0005515
Mepo6g04085 408 SMART iq_5 78 100 IPR000048 GO:0005515
Mepo6g04085 408 SMART iq_5 101 122 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04085 Mepo-Chr6 53068180 53070477 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04085 1 390 IQD Protein Family AT1G72670 45.972 5.79e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04085 - - tpra:123894121 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04085 6 53068180 53070477 Mepo1g04243 1 49708484 49711258 PCT