Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04081 ATGACGATGAGAGAACTAGCGCGTGGAGTTGTTGATGGTCGAGATAGAAAGGTGTATAAGAATGACGTGATCACTGCCTTGCGATACAACATTGAGAAAATGGTGTGTGCATCCAGAGATATTGTTCATATGTTAAGTAGGATGTCCTATGAAGGCTTGGATGACCAGAGGATGCATTTTGTATTAAGGATGAAAGAAATTGCTCATGGGATTGTTGATAAGCAACCTAGAGTTGCAACAGTTAGGCCTGAGCTACTTGTCGACCAAGTTTGCTTTGTGGATGAAGGGACAAGAGACAGTACTCTCGTGGTTGAGTTAACCAAAATCTGCAATGGGGATGCTCTAATTGACGAGGGACAAAGCATGATACATGAAGATGACATGTTGAACGTGAACCACGTCTTGATGCCTCAAAGAGTGTATCTACTCCGTGGAAATCACGAATCAAGATATTGCACTGGAAAATATGGTTTTAAGAAGGAGGTGCAGACTAAATATGGCAATCAAGGTGAAGATGTGTACAATAAATTCTTAGAGTGTTTCAAGGAGCTTCCATTAGCTTTGGTTATTGCCGACTGTGTTTATACAACCCATGGAGGGCTTTTTCGTAGCATTCATGTCGTTGCTGTCCCTTCAGGAAAGCCAAAACGGAAGAAGACACAGAGTGGACCTTGGTTCTTTAGCAGATTTATCTCAAGTTAA 702 0.4174 MTMRELARGVVDGRDRKVYKNDVITALRYNIEKMVCASRDIVHMLSRMSYEGLDDQRMHFVLRMKEIAHGIVDKQPRVATVRPELLVDQVCFVDEGTRDSTLVVELTKICNGDALIDEGQSMIHEDDMLNVNHVLMPQRVYLLRGNHESRYCTGKYGFKKEVQTKYGNQGEDVYNKFLECFKELPLALVIADCVYTTHGGLFRSIHVVAVPSGKPKRKKTQSGPWFFSRFISS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04081 233 Pfam Calcineurin-like phosphoesterase 109 200 IPR004843 GO:0016787
Mepo6g04081 233 SUPERFAMILY Metallo-dependent phosphatases 134 205 IPR029052 -
Mepo6g04081 233 Gene3D - 92 223 IPR029052 -
Mepo6g04081 233 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 132 205 - -
Mepo6g04081 233 ProSitePatterns Serine/threonine specific protein phosphatases signature. 143 148 IPR006186 GO:0016787
Mepo6g04081 233 PRINTS Serine/threonine phosphatase family signature 142 166 IPR006186 GO:0016787
Mepo6g04081 233 PRINTS Serine/threonine phosphatase family signature 179 205 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04081 Mepo-Chr6 53026909 53029738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04081 109 204 Calmodulin-binding Proteins AT5G63870 58.333 1.75e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04081 K04460 - gmx:100779241 152.14