Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04075 ATGGGAAATCATAAGTGGACATCTGAAACAGAAGAAGCGTTACAAAAAGGTGTCAAGAAATACGGCGTCGGAAAGTGGACAAATATTCTAAAAGACCCTGAGCTCGGCAAAATACTTGTTGGTCGTTCCAACACTAATCTCAAGGATAAATGGCGGAATTTAACTTCTAAGGCCACATCATTTGTTCCTTATCCTGCTGCTTCTTCAGTCAATGCTACTTCGTCTCATGTTGTTCCTGCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCTATCTCTAGTCAATGCTACTCTGCAAAGTGTTACTACTGCACCACAAAATCAAGTTGAAATTCAGTCTCTTACTAACCAACCTTCTCAAAGCGATGAAGATGCCAAAATCTATCCAAAGTATAATTCTTTTCTAACTTTTTAA 411 0.4039 MGNHKWTSETEEALQKGVKKYGVGKWTNILKDPELGKILVGRSNTNLKDKWRNLTSKATSFVPYPAASSVNATSSHVVPAAPAPAPAPALSLVNATLQSVTTAPQNQVEIQSLTNQPSQSDEDAKIYPKYNSFLTF 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04075 136 FunFam Telomere repeat-binding factor 1 2 57 - -
Mepo6g04075 136 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 59 IPR017930 -
Mepo6g04075 136 Gene3D - 6 98 - -
Mepo6g04075 136 Pfam Myb-like DNA-binding domain 5 54 IPR001005 -
Mepo6g04075 136 PANTHER SINGLE MYB HISTONE 4 1 104 IPR044597 GO:0003691
Mepo6g04075 136 CDD SANT_TRF 4 55 - -
Mepo6g04075 136 ProSiteProfiles Myb-like domain profile. 1 55 IPR001005 -
Mepo6g04075 136 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Mepo6g04075 136 SMART sant 2 57 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04075 1 55 Single Myb Histone (SMH) Gene Family AT1G17520 64.912 1.06e-19 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo6g04075 Myb_DNA-binding 2.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04075 K09422 - gmx:780537 99.3673