Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04070 ATGGCTTCAAATGGAGAAGAAGAATCCTCCACCGTGATCGCCATTGATTCCGACAAGAACAGCCAACACGCTGTAAAGTGGGCCGTTGATCACCTTTTGGAAAAGTACTCATCATGCACCCTCATTCACGTTAGAACCAAGCCCTTCAATTCAAATGAATTTGATTTTGTCCCTAAACAAGGTCGTCCACCGACCGAAGAAGAATTGCATCAATTCTTTCTCCCCTTCCGAGGATTTTGTGCTCGAAAAGGGATCATAGCTGAGGAGTTGGTCCTGCATGACATTGATGTTCCAAGTGCACTTACTGATTACATCATCGACAACTCTATCACCAACGTTGTTCTTGGTGCTCCCCGCTGGAATAATGCTTTTATAAGGAAATTTAAAGATGTAGATGTGCCAACAAGCTTAGTGAAGTCTCTGCCAGAGACTTGCACGGTGCATATTATATCAAAAGGAAAAGTCCAGAGTATTCAAGCAACTGCTCCTTCCCAAACCATTACTATTTCTAGTCCAAAGCCAGATTATTTGACCAAAGACTTAAACAGAAAATCACACAATAGAATACAGCGGCGCTTAAGCAGCGATGGTGGATCCTTTGGTCAAAAAAAGGATGCAAGACTAGGATCAAGATGTATGTCCCAAAGAGATACTTATCCACGGAGGATATCCCTATCAGATGACAACCAATATTCGAATAGCATGGAGACAGAAATAAACAGATTAAAGCAAGAGCAGAAGAGAACAAAAAAGAAGTGTAGGTCTGCATCAGTTGGTAGAGAAGCCGGTTTTGCAAAACAGAAGGTAATTAATGTGCATGAAGAAGAAAGAATGACAACATCAAATGAAATTGAACGCAACAAATTTATATTTAAAAGATACAATATTGAAGAAATTGAAGTTGCAACAAATTACTTTGATATGGATGGCAAAATCGGTGAAGGTGGATATGGACCTGTTTTCAAAGGAGTACTTGATAACACTGCTGTTGCAGTTAAAGCCTTAAGACCAGACATGACTCAAGGGGAGAAACAATTTAATCAAGAGGTCCTTGTTTTAGGCTCCATAAGACATCCCAACATTGTAGTACTTTTAGGCGCCTGTCCGGAGTTCGGATGCCTCATATACGAGTACCTAGACAACGGAAGCTTAGAAGATCGTCTTTTCCAAAAAGACAACACGCCACCAATTCCATGGAAGACTCGATTCAAAATAGCATCAGAAATTGCGACAGGCCTTCTTTTCCTTCACCAGACAAAACCAGAACCAGTTGTGCATCGCGATCTCAAACCAGCAAACATTCTCTTAGACAGAAACTACGTAAGCAAGATCAGCGATGTTGGTTTGGCAAGGCTTGTTCCACCTTCTGTAGCAAACAAAACTACTGAATATCACAAGACAAATGCAGCCGGAACATTTTTTTATATTGATCCGGAGTATCAACAAACAGGACTATTGGGCGTAAAATCAGACATATATTCATTAGGTGTTATGCTTCTACAAATCATTACTGGAAAGCCTCCTATGGGTGTTGCTCACCTTGTTGAGGAGGCCATTGAGAATAATAACCTTGCAGAGGTGCTTGATCCGAATGTGACCGATTGGCCGTTGGAAGAGGCTTTATCACTTGCTAAATTAGCTTTGAAGTGTTGTGAGATGAAAAAAAAGGATAGACCAAATCTTGCTTCTGTCATTTTGCCAGAACTAAATAGACTCAGAGATCTATAA 1728 0.4062 MASNGEEESSTVIAIDSDKNSQHAVKWAVDHLLEKYSSCTLIHVRTKPFNSNEFDFVPKQGRPPTEEELHQFFLPFRGFCARKGIIAEELVLHDIDVPSALTDYIIDNSITNVVLGAPRWNNAFIRKFKDVDVPTSLVKSLPETCTVHIISKGKVQSIQATAPSQTITISSPKPDYLTKDLNRKSHNRIQRRLSSDGGSFGQKKDARLGSRCMSQRDTYPRRISLSDDNQYSNSMETEINRLKQEQKRTKKKCRSASVGREAGFAKQKVINVHEEERMTTSNEIERNKFIFKRYNIEEIEVATNYFDMDGKIGEGGYGPVFKGVLDNTAVAVKALRPDMTQGEKQFNQEVLVLGSIRHPNIVVLLGACPEFGCLIYEYLDNGSLEDRLFQKDNTPPIPWKTRFKIASEIATGLLFLHQTKPEPVVHRDLKPANILLDRNYVSKISDVGLARLVPPSVANKTTEYHKTNAAGTFFYIDPEYQQTGLLGVKSDIYSLGVMLLQIITGKPPMGVAHLVEEAIENNNLAEVLDPNVTDWPLEEALSLAKLALKCCEMKKKDRPNLASVILPELNRLRDL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04070 575 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 120 - -
Mepo6g04070 575 Gene3D Phosphorylase Kinase; domain 1 275 378 - -
Mepo6g04070 575 Pfam Protein kinase domain 308 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04070 575 CDD STK_N 10 153 - -
Mepo6g04070 575 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 278 378 - -
Mepo6g04070 575 ProSiteProfiles Protein kinase domain profile. 306 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04070 575 SMART serkin_6 306 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04070 575 SUPERFAMILY Protein kinase-like (PK-like) 285 565 IPR011009 -
Mepo6g04070 575 CDD STKc_IRAK 312 572 - -
Mepo6g04070 575 FunFam Os07g0541700 protein 379 472 - -
Mepo6g04070 575 Gene3D HUPs 10 147 IPR014729 -
Mepo6g04070 575 Coils Coil 232 252 - -
Mepo6g04070 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Mepo6g04070 575 Gene3D Transferase(Phosphotransferase) domain 1 379 574 - -
Mepo6g04070 575 PANTHER OS02G0152300 PROTEIN 272 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04070 Mepo-Chr6 52922127 52924589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04070 274 575 Receptor kinase-like Gene Family AT1G78940 66.556 1.95e-146 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mepo6g04070 Pkinase 7.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04070 - - gmx:100802306 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04204 1 49154073 49157745 Mepo6g04070 6 52922127 52924589 PCT