Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04050 ATGGCGAACCCTTCTGGTACTGGTGGTAATCATCAAGAACAACATACTCAGGTGAATCCTTCTTCTTTTAACGGCAATTCCGTTCCTGAAACCTCTTCAGGTCTTGTTATGAACATGAAGCATAATCCTGGCATATCTCTTGATTGGTCCCCTGAAGAACAATCCATTCTCGAAGATGGACTCGCCAAGTATGCCTCAGAATCTAGCATAGCGCGCTATGCAAAGATAGCCCAACAGCTAAATAACAAGACAGTCCGGGATGTGGCGCTGCGAGTCAGGTGGATGAACAAGAAAGAAAATAGCAAGAGAAGGAAGGATGATCACAATTTGTCTCGAAAAAGTAAAGATAAAAAGGAACGAGTTTCTGATCCTGCAGCAAAATCATCTCATTTTGCTGCTCGTCCCAGTGTCCCTCCATATGCGCCACCAATGATTACTATGGACAATGATGATGGCATCCCTTATTCAGCAATTGGAGGTCCCACTGCTGAGCTATTAGAGCAGAATGCACAGACCATGACCCAAATCTCTGCAAACCTTTCCTCTCTCCAGTTACAGGAAAACATCAACCTTTTGTGCCAAACTAGGGACAACATCATCAGAATTATGAATGAGATGAATGATTCACCAGCGGTGATGAAGCAAATGCCGCCTCTTCCAGTGAAGATGAATGAAGAGCTGTCCCGTTCCATACTCCCAGGAACACCTCTCCATCCTCAGTCATGA 726 0.4477 MANPSGTGGNHQEQHTQVNPSSFNGNSVPETSSGLVMNMKHNPGISLDWSPEEQSILEDGLAKYASESSIARYAKIAQQLNNKTVRDVALRVRWMNKKENSKRRKDDHNLSRKSKDKKERVSDPAAKSSHFAARPSVPPYAPPMITMDNDDGIPYSAIGGPTAELLEQNAQTMTQISANLSSLQLQENINLLCQTRDNIIRIMNEMNDSPAVMKQMPPLPVKMNEELSRSILPGTPLHPQS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04050 241 CDD SANT 49 98 IPR001005 -
Mepo6g04050 241 MobiDBLite consensus disorder prediction 96 125 - -
Mepo6g04050 241 SUPERFAMILY Homeodomain-like 41 102 IPR009057 -
Mepo6g04050 241 Pfam Protein of unknown function (DUF3755) 182 215 IPR022228 -
Mepo6g04050 241 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 9 239 - -
Mepo6g04050 241 Gene3D - 48 98 - -
Mepo6g04050 241 MobiDBLite consensus disorder prediction 1 39 - -
Mepo6g04050 241 SMART sant 45 98 IPR001005 -
Mepo6g04050 241 MobiDBLite consensus disorder prediction 96 148 - -
Mepo6g04050 241 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04050 Mepo-Chr6 52759554 52766155 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo6g04050 DUF3755 8.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04050 - - cam:101498979 420.624