Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04044 ATGTACCATAAAGAGGACCAAAATATGGAGATAAGTGCTTACAATACTTCAAATAAATCAACGCACTTGAAGAAGTTGAACCATCAAAATAATAGCTATTTTCTTCATGAAGCTTCAACCATAGACATGATGCATACATCATCAAGCAATCATCAAACATCTTCAGATAATTCTAGTGAGACATGTCATCGTGATCAAGATGGTAAATGGTCCTCCAAACTTCTCAAAGAGTGTGCAATTGCAATATCTAATAGAGACTCATCAAAAATCCACCATCTTCTTTGGATGTTAAACGAGTTATCTTCACCTTATGGAGATATTGATCAAAAACTAGCTTCATATTTTTTACAAGCTCTATTTTCCAAGGCAACACAATCTGGTCACAAGTGTTACAAAACACTATCCTCAATCGCTTACAAAAACCACTCTTTTGATTCAGCAAGAAAGTTAATACTCAAGTTTCAAGAGGTAAGTCCATGGACAACTTTTGGACATGTGGCATCAAATGGTGCTATTTTAGAAGCTTTAGAAGGAGAGAAAAAGCTTCACATAATTGATATTAGCAACACACTTTGTACTCAATGGCCTACTCTTCTAGAAGCTTTGGCAACAAGAAATGATGAAACTCCTCACCTTAAGCTCACAATTGTTGTCACAAATAATAGTTCTAGTGTTGTTGTTATGAAGGAAGTTGGTCAAAGAATGGAGAAATTTGCTAGGCTTATGGGAGTACCTTTTGAGTTGAATGTTATTAGTGATTTGAAACATATACGAGAATTAACAAAAGAGAGGTTAGGAATTCAAGAAGGTGAAGCAATAGCTTTGAATTGTGTTGGAGCATTGAGAAGAGTTGAAGTTGAAGAAAGAGAAAGTGTGGTTCAATTTTTCAAATCACTTAGTCCTAGAGTTGTGACATTTGTTGAGGAAGAAGGTGATTTTTGTAGTGATGATTTTGTTAAAGGTTTTGAAGAGTGTCTTAAGTTTTATAGAATTTATTTTGAGATGTTAGAGGAGAGTTTTCCACCAACAAGTAATGAGAGGTTAATGTTGGAAAGGGAGTGTTCAAGAAGCATAGTTAGGGTTTTGGCTTGTGATCATGAATTTGATGATGATGAAGATGATGTTGGTGATTATTGTGAGAAAAGAGAGAGAGGAAAACAATGGTTTGAAAGGCTTAGGAATGAATTTTCACCTTGTGGATTTAGTGATGATGTTGTGGATGACGTCAAAGCATTGCTTAAGAGGTATCAAGCTGGTTGGTCACTTGTTGTGCCTCAAGGAGATGATCATATTTCAGGAATGTACCTCACATGGAAGGAGGAGCCAGTTGTTTGGGCATCAACATGGAAACCCTAG 1356 0.3591 MYHKEDQNMEISAYNTSNKSTHLKKLNHQNNSYFLHEASTIDMMHTSSSNHQTSSDNSSETCHRDQDGKWSSKLLKECAIAISNRDSSKIHHLLWMLNELSSPYGDIDQKLASYFLQALFSKATQSGHKCYKTLSSIAYKNHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGEKKLHIIDISNTLCTQWPTLLEALATRNDETPHLKLTIVVTNNSSSVVVMKEVGQRMEKFARLMGVPFELNVISDLKHIRELTKERLGIQEGEAIALNCVGALRRVEVEERESVVQFFKSLSPRVVTFVEEEGDFCSDDFVKGFEECLKFYRIYFEMLEESFPPTSNERLMLERECSRSIVRVLACDHEFDDDEDDVGDYCEKRERGKQWFERLRNEFSPCGFSDDVVDDVKALLKRYQAGWSLVVPQGDDHISGMYLTWKEEPVVWASTWKP 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04044 451 Pfam GRAS domain family 73 450 IPR005202 -
Mepo6g04044 451 ProSiteProfiles GRAS family profile. 62 450 IPR005202 -
Mepo6g04044 451 MobiDBLite consensus disorder prediction 45 65 - -
Mepo6g04044 451 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 57 440 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04044 Mepo-Chr6 52714940 52716883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04044 67 451 GRAS Transcription Factor Family AT4G37650 51.980 1.96e-145 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo6g04044 GRAS 6.9e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04044 - - lang:109357825 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g04132 1 48084244 48086043 Mepo6g04044 6 52714940 52716883 PCT