Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04041 ATGGAAAAGGACAAATCTTTGGGTCTTGGCGGTGGTTTTCCACCTCCATCAGGACGTTATCCAGGTTATTCACCAACTGGAAGTGGTTTCAATGTGAAATCTGAACCCCCATCATCGTCGTATCCGCCGCTTGTTCCTGGAACCAGCTCAGATTCTAGTGGCTTTAGTCATGATATAAGCAAAATGTCTGACAATCCTCCGAGAAATAGAGGTCATAGACGTGCTCATTCCGAGATTCTTACCCTGCCGGATGATATTAGCTTTGATAGTGACCTCGGTGTAGTTGGTGGTGCTGATGGACCGTCGTTCTCTGATGATACCGAGGAAGATTTGTTGTCCATGTACCTTGATATGGATAAGTTCAATTCGTCGTCAGCAACGTCTAATTTTCAAATGGGTGAGGGGTCTAATGCTGCCGGAGCATCGGGTTTGGCACCAATGTCGGTAGGGCAGACATCAGGAGGAGGTACCTCTTCTGGGGAAAATATGGCAGTTGGTACTACAAATGAAAGGCCCAGAATCAGACACCAGCACAGCCAGTCCATGGATGGGTCAACAACAATCAAACCTGAGATGTTAGTCTCAGGTTCAGATGACATGTCTGCAGCTGATTCCAAAAAAGCAATGTCAGCGGCCAAGCTTGCAGAACTTGCCTTGATTGACCCCAAGCGTGCAAAAAGGATATGGGCAAATAGGCAGTCTGCGGCAAGGTCAAAAGAGAGGAAGATGCGCTATATTGCTGAGCTTGAAAGGAAAGTGCAGACATTGCAAACGGAAGCAACATCTTTGTCTGCACAGTTAACTCTCTTACAGAGAGATACAAGTGGACTGAATTCTGAGAACAGTGAGCTGAAGCTGCGGTTGCAAACCATGGAGCAACAAGTTCACTTGCAGGATGCTTTAAATGACGCGTTAAAAGAGGAAATTACACATTTGAAAGTACTTACTGGGCAAGCTATGCCGCCAAATGGAGGACCTATGAACTTTGCTTCTTTTGGAGGAGGGCAACAGTTCTATCCCAATAATAATCATGCCATGCACACTCTTTTGGCTGCACAACAGTTTCAACAGCTCCAAATTCATCCTCAGAAACAGCAGCAACATCAGTTTCAGCAACAAATACAACAACAACAACAAATACAGCAGCAACAAATGCAACAGCAACAAATGCAGCAGCAGCAGCAGGAACAACAACAACAATCAGGTGACTTGAAAATGAGAGCAACTGCACCTCCATGCCCCAAAGATAATCCTTCATCAGATGTAAATCCTTCGGCAGCCAAGGATTGTTGA 1293 0.4548 MEKDKSLGLGGGFPPPSGRYPGYSPTGSGFNVKSEPPSSSYPPLVPGTSSDSSGFSHDISKMSDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDTEEDLLSMYLDMDKFNSSSATSNFQMGEGSNAAGASGLAPMSVGQTSGGGTSSGENMAVGTTNERPRIRHQHSQSMDGSTTIKPEMLVSGSDDMSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTSGLNSENSELKLRLQTMEQQVHLQDALNDALKEEITHLKVLTGQAMPPNGGPMNFASFGGGQQFYPNNNHAMHTLLAAQQFQQLQIHPQKQQQHQFQQQIQQQQQIQQQQMQQQQMQQQQQEQQQQSGDLKMRATAPPCPKDNPSSDVNPSAAKDC 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04041 430 MobiDBLite consensus disorder prediction 385 405 - -
Mepo6g04041 430 Coils Coil 378 400 - -
Mepo6g04041 430 MobiDBLite consensus disorder prediction 27 62 - -
Mepo6g04041 430 Coils Coil 239 308 - -
Mepo6g04041 430 SMART brlzneu 219 283 IPR004827 GO:0003700|GO:0006355
Mepo6g04041 430 CDD bZIP_plant_RF2 224 273 IPR044759 GO:0003700|GO:0006355
Mepo6g04041 430 MobiDBLite consensus disorder prediction 63 80 - -
Mepo6g04041 430 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 35 399 - -
Mepo6g04041 430 Pfam bZIP transcription factor 223 281 IPR004827 GO:0003700|GO:0006355
Mepo6g04041 430 Gene3D - 222 294 - -
Mepo6g04041 430 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 221 284 IPR004827 GO:0003700|GO:0006355
Mepo6g04041 430 MobiDBLite consensus disorder prediction 146 166 - -
Mepo6g04041 430 FunFam probable transcription factor PosF21 222 275 - -
Mepo6g04041 430 MobiDBLite consensus disorder prediction 1 82 - -
Mepo6g04041 430 MobiDBLite consensus disorder prediction 385 430 - -
Mepo6g04041 430 SUPERFAMILY Leucine zipper domain 223 274 IPR046347 GO:0003700|GO:0006355
Mepo6g04041 430 MobiDBLite consensus disorder prediction 132 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04041 Mepo-Chr6 52661377 52665362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04041 19 352 bZIP Transcription Factor Family AT1G06070 73.810 3.30e-169 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo6g04041 bZIP_1 2.2e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g04041 6 52661377 52665362 Mepo6g04041 6 52661377 52665362 ECH