Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g04033 ATGGGGTTCTCAAGAAAACAATTCTCAACCTACCTTTTGAATACTATTTTATTTGAGGTTGTTGTTTTTTCATGGTTATGGTCAAAAGTAACTGGTCTTGGTTCCATGTCATCAATTGCTGTCTCTTATGGGGATAAAGGTTCTGCTTTCTGTGGTTTGAAATCAGATGGATCTCACACTGTGACATGTTATGGAATGAACTCAGCCATAGTTTATGGAACACCATCTCAGTTTCCATTCCTTGGTCTAACTTCTGGAGATGGTTTTGTTTGTGGACTTTTAATGAGTTCAAATCAACCATATTGTTGGGGAAGTAGTAGCCATATAGAAATGGGTGTGCCACAACCTATGTTTAAGGATGCTCAGTACTTAGAAATCAGTGCCGGCGATTATCATGTTTGTGGTTTGAGGAAACCTTTGACAGGAAGACACAGGAACTTTTCTTTTGTTGATTGTTGGGGATACAATATGACAAAGAACTATGTGTTTGATGGACAGATTCAATCGATTTCGGCAGGTTCTGAGTTCAATTGTGGACTTTTTTCGCAGAATCGAACGGTATTTTGTTGGGGCGATGAGGTTAGTACTCAAGTTATTAGGTTGATTCCACAAGGAATGAGGTTTCAGAAGGTGTCTTGTGGAGGGTATCATGTATGTGGAATCTTGGAAGGTGTGAATTCTAGAACTGTTTGTTGGGGGAGAAGTTTGAATTTGGAGGAAGAAATTTCATTGATACCTAATCAAGGACAAGGTGGTAATGTTGAGTTGGCTCCATTTGATCCTATGCTTTCTGTTGTTGGAGGAAAGTTTCATGCTTGTGGCATTAAGAGCTATGATCATGGAGTTATTTGTTGGGGGTTAAATTTGAAAACAAGCACAAAAGTTCCTAAAGGGATTAAAGTGTTTGACATTGCAGCTGGTGATTATTTTACCTGTGGAATTCTTGCTGCAAAATCTCTTGAATCTATTTGTTGGGGTGTTGGATTTCCAACTTCTCTACCTTTGGCTGTTTCACCAAGAACAAGGAAGTGTTTGTCTGCACCTTGTCCTCCAAGTTACTATGAAATTGAAAAGGATCAACAAAATGGTCTAATTTGTCAAGATCCAAATTCTCACCTATGTGTTCCATGCAGTGGTGTTTGTCCTGATGAAATGTATCAGAAAAGTGGTTGCAATTTGAAATCTGATATACTATGTGAATATAATTGTTCTGTTTGTTCTTCACCGGAATGCTTCTCAAACTGTTCCTCCTCTTCTTCTCCCAATGCTGCTAATGGTGGGAAGAAAAGTGAAAGATTTTGGTCTATACAGTTGATAGTTATTGTTGGTGAGATAGTATTTGCTGTTTTTATAGTTAGTGCTGTCTCCATTACCGCGGTTATGTATGTTCGCTACAAGCTAAGAGATTGTGAGTGTTCAACAAGACCATTAAACTCGATGAAGAGACTCAATGTTAGTTCTACGGTTCAAAAGGATAACGGTAAGGTTCAACCGGACGCGGAGGAGATCAAGATAAGAAGGGCTCAGAAGTTCTCCTATGAGGAACTTGAAAATGCAACCTGTGGATTCAAAGAAGAATCAATTGTTGGGAAAGGAAGTTTTTCATGTGTGTTCAAAGGTGTTCTCAAAGATGGAACGGTTGTTGCTGTTAAAAGGGCTATTATGTCTCCAAACATGCAGAAAAATTCCAAAGAGTTTCACACAGAACTTGACTTGTTATCTAGGTTGAACCATGCTCATTTGCTCAACCTATTAGGCTATTGTGAAGAAGGAGGTGAAAGACTACTTGTATATGAGTACATGGCACATGGATCATTGCATCAACATCTTCATGGCAAAAACAAAGAGTTGAAAGAGCAATTGGATTGGATCCGAAGGGTAACAATTGCAGTCCAAGCAGCTAGAGGAATCGAATATCTCCACGGCTATGCATGCCCACCGGTGATTCATAGAGACATCAAATCTTCAAACATACTCATTGATGAAGAACACAATGCAAGAGTTTCGGATTTCGGTTTGTCGTTACTAGGTCCAACAGATAGTAGCTCCCCACTGGCCGAGTTACCGGCCGGAACACTTGGTTATCTTGATCCTGAATACTATAGACTTCACTACCTCACAACAAAGTCAGATGTTTATAGCTTTGGTGTTCTACTATTAGAAATTCTAAGTGGTAGAAAAGCTATTGATATGCAATATGAAGAAGGTAACATTGTTCAATGGTCAGTTCCATTAATAAAATCGGGCGATATACCTTCGATTTTAGACCCTTGTTTGAAACCACCTTCTGATATTGAAGCATTGAGAAGAATAGCGAATGTTGCTTGTAAATGTGTGAGAATGAGAGGTAAAGATAGGCCTTCAATGGACAAAGTAACAACAAGTTTGGAAAGAGCTTTAGCAATGTTAATGGGAAGTCCTTGTATTGATCAACCAATTTTGCCAACTGAAGTTGTCTTAGGAAGTAATAGAATGCATAAGAAAACATCTCAAAGGTCTTCAAATCGGTCGGCTTCAGAAATCGATGTAGTCGAAGGTGAAGACCAAAGGTTTGAGTTTAGAGCACCTTCTTGGATAACTTTTCCAAGTGTAACTTCTTCTCAAAGAAGAAAGTCTTCAGGGTCAGAAGGTGAAGTTGAAGTGAAGATTGTTGAAGGAAGAAACTATGGTAATGTTGTTGGTGGTGGAGGTGATGTTTTGAGAAGTCTCGAGGAAGAAATTGGTCCCGCTTCTCCTCAAGAGAGACTCTTCTTGCAACACAACTTCTAA 2769 0.3911 MGFSRKQFSTYLLNTILFEVVVFSWLWSKVTGLGSMSSIAVSYGDKGSAFCGLKSDGSHTVTCYGMNSAIVYGTPSQFPFLGLTSGDGFVCGLLMSSNQPYCWGSSSHIEMGVPQPMFKDAQYLEISAGDYHVCGLRKPLTGRHRNFSFVDCWGYNMTKNYVFDGQIQSISAGSEFNCGLFSQNRTVFCWGDEVSTQVIRLIPQGMRFQKVSCGGYHVCGILEGVNSRTVCWGRSLNLEEEISLIPNQGQGGNVELAPFDPMLSVVGGKFHACGIKSYDHGVICWGLNLKTSTKVPKGIKVFDIAAGDYFTCGILAAKSLESICWGVGFPTSLPLAVSPRTRKCLSAPCPPSYYEIEKDQQNGLICQDPNSHLCVPCSGVCPDEMYQKSGCNLKSDILCEYNCSVCSSPECFSNCSSSSSPNAANGGKKSERFWSIQLIVIVGEIVFAVFIVSAVSITAVMYVRYKLRDCECSTRPLNSMKRLNVSSTVQKDNGKVQPDAEEIKIRRAQKFSYEELENATCGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEYMAHGSLHQHLHGKNKELKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVSDFGLSLLGPTDSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVQWSVPLIKSGDIPSILDPCLKPPSDIEALRRIANVACKCVRMRGKDRPSMDKVTTSLERALAMLMGSPCIDQPILPTEVVLGSNRMHKKTSQRSSNRSASEIDVVEGEDQRFEFRAPSWITFPSVTSSQRRKSSGSEGEVEVKIVEGRNYGNVVGGGGDVLRSLEEEIGPASPQERLFLQHNF 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g04033 922 FunFam serine/threonine-protein kinase-like protein CCR1 493 600 - -
Mepo6g04033 922 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 348 399 IPR001368 GO:0005515
Mepo6g04033 922 FunFam Serine/threonine-protein kinase-like protein CR4 32 199 - -
Mepo6g04033 922 Gene3D Phosphorylase Kinase; domain 1 494 600 - -
Mepo6g04033 922 SUPERFAMILY RCC1/BLIP-II 33 289 IPR009091 -
Mepo6g04033 922 Gene3D Transferase(Phosphotransferase) domain 1 601 804 - -
Mepo6g04033 922 SMART serkin_6 523 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04033 922 Pfam Protein tyrosine and serine/threonine kinase 526 795 IPR001245 GO:0004672|GO:0006468
Mepo6g04033 922 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 98 139 IPR000408 -
Mepo6g04033 922 SUPERFAMILY Protein kinase-like (PK-like) 505 796 IPR011009 -
Mepo6g04033 922 ProSiteProfiles Protein kinase domain profile. 523 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g04033 922 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Mepo6g04033 922 FunFam Receptor protein kinase CRINKLY4 601 803 - -
Mepo6g04033 922 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 17 922 - -
Mepo6g04033 922 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Mepo6g04033 922 Gene3D - 83 348 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g04033 Mepo-Chr6 52602983 52606155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g04033 16 922 Receptor kinase-like Gene Family AT3G59420 66.594 0.0 1221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mepo6g04033 Pkinase 9.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g04033 - - gmx:100809215 1443.33