Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03996 ATGGGCTCAAATAACTGGCTTTCATTTCCACTTTCTCCAACTCATCATCCTTCATTACCACCTCATCTTCAACCAACTCAATCTCATCATCATCACTTTTCTCTTGGGACATTAGTCAATGACAACATGTTGGAAACCCCTTTCCAAAATCATGATTGGAACTTGATGAATAGTAGTCACAACTCAAACGAAGTTCCAAAGGTTGCAGATTTTCTTGGTGTGAGCAGCAAGAGTACTGAAAATGAGTCAGATCTTGCAGCCTTTAATGAAATGAATAACTCAAATCATCATTCTTTAGATAATTACTTGTTCATGCCGCCAGTACAAAATAACTCAGCAACTTCTAGCAACAACTATGATCAATATGAAGAAAATGCAAACAATAATCTGCAGTCATTGACATTATCAATGGGAAGTGGTACTACTAAGGATTCCACATGTGAAACTAGTGGTGATAATAATATCGTCGAAGCAGCTGCAACACCTAGAAGAGCTTTGGATACCTTTGGCCAAAGAACATCAATATATCGTGGTGTAACAAGACATAGATGGACCGGAAGGTATGAAGCTCACCTTTGGGATAATACCTGTAGAAGGGAAGGACAATCAAGAAAAGGTCGTCAAGTTTATTTAGGTGGGTATGACAAAGAAGAGAAAGCAGCAAGAGCTTATGATTTAGCAGCACTAAAATACTGGGGAACATCTACCACTACAAACTTTCCCATCAGTAACTATGAGAAGGAAGTAGAAGATATGAAGCACATGACAAGACTAGAATTTGTTGCCGCCATAAGAAGAAAGAGCAGTGGATTTTCAAGGGGTGCATCAATGTATCGCGGAGTCACAAGGCATCACCAGCATGGAAGATGGCAAGCAAGAATTGGCCGAGTTGCAGGAAACAAAGATCTTTACTTAGGAACTTTTGGTACTGAGGAGGAGGCTGCAGAAGCATATGACATAGCTGCAATCAAGTTCAGAGGATTAAACGCAGTAACAAACTTTGACATGAATCGTTACGACGTGAAAGCGATTCTTGAAAGTAACACTCTCCCAATAGGAGGAGGTGCTGCAAAAAGATTAAAAGAAGCACAAGCTCTAGAATCTTCTAGAAAAAGGGAACAAGAGATGATAGCACTTGCAGGCTCAACTTTTCAATATGGAATATCCTCAAACTCAAGTAGGATACAATTACAAGGATACCCTTTAATGCAGTTTGAACAACATGCACAATTACAAAACCTATATGATAGTAGTACTCAAGATACAACGTCGTTTGATCAGAGTTATATACAAACTCAGCTTCAGTTACAACAACAACAAAGTGGAGGATTCTACAACTACGATGGTAATTTCGTTCAGAATAACCCGGGTTTGATGAACATGGGTGTGATAGAGAATAATGGTGGTGGAGGGTATATTGGGAATATGAATTGTGGGAATAACAATGTTGTTGGTGAACATGCAGCGGAGGAAGTTGCATATGTTAAGGTTGATTATGACATGCCTTCCGGAGATTATGGAGGTTGGTCGGGTGCAGATGCTTCAAATGCTGGTGTTCTTACAATGTGGAATGATCATTTGACTAAATTAACTTGA 1596 0.3935 MGSNNWLSFPLSPTHHPSLPPHLQPTQSHHHHFSLGTLVNDNMLETPFQNHDWNLMNSSHNSNEVPKVADFLGVSSKSTENESDLAAFNEMNNSNHHSLDNYLFMPPVQNNSATSSNNYDQYEENANNNLQSLTLSMGSGTTKDSTCETSGDNNIVEAAATPRRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNTCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKEVEDMKHMTRLEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTEEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREQEMIALAGSTFQYGISSNSSRIQLQGYPLMQFEQHAQLQNLYDSSTQDTTSFDQSYIQTQLQLQQQQSGGFYNYDGNFVQNNPGLMNMGVIENNGGGGYIGNMNCGNNNVVGEHAAEEVAYVKVDYDMPSGDYGGWSGADASNAGVLTMWNDHLTKLT 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03996 531 PRINTS Ethylene responsive element binding protein signature 317 337 IPR001471 GO:0003700|GO:0006355
Mepo6g03996 531 PRINTS Ethylene responsive element binding protein signature 176 187 IPR001471 GO:0003700|GO:0006355
Mepo6g03996 531 ProSiteProfiles AP2/ERF domain profile. 175 241 IPR001471 GO:0003700|GO:0006355
Mepo6g03996 531 Pfam AP2 domain 278 327 IPR001471 GO:0003700|GO:0006355
Mepo6g03996 531 Pfam AP2 domain 175 233 IPR001471 GO:0003700|GO:0006355
Mepo6g03996 531 ProSiteProfiles AP2/ERF domain profile. 277 335 IPR001471 GO:0003700|GO:0006355
Mepo6g03996 531 FunFam AP2-like ethylene-responsive transcription factor 276 337 - -
Mepo6g03996 531 CDD AP2 174 243 IPR001471 GO:0003700|GO:0006355
Mepo6g03996 531 SUPERFAMILY DNA-binding domain 276 336 IPR016177 GO:0003677
Mepo6g03996 531 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 66 413 - -
Mepo6g03996 531 SMART rav1_2 277 341 IPR001471 GO:0003700|GO:0006355
Mepo6g03996 531 SMART rav1_2 175 247 IPR001471 GO:0003700|GO:0006355
Mepo6g03996 531 Gene3D AP2/ERF domain 277 337 IPR036955 GO:0003700|GO:0006355
Mepo6g03996 531 Gene3D AP2/ERF domain 175 243 IPR036955 GO:0003700|GO:0006355
Mepo6g03996 531 SUPERFAMILY DNA-binding domain 174 243 IPR016177 GO:0003677
Mepo6g03996 531 CDD AP2 276 335 IPR001471 GO:0003700|GO:0006355
Mepo6g03996 531 FunFam AP2-like ethylene-responsive transcription factor ANT 174 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03996 Mepo-Chr6 52170826 52173937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03996 1 525 AP2-EREBP Transcription Factor Family AT1G51190 59.762 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mepo6g03996 AP2 9.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03996 K09285 - pvy:116115844 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03996 6 52170826 52173937 Mepo6g03996 6 52170826 52173937 ECH