Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03990 ATGAATGGTTCTGGTTTGGGTGGTGGGTTTTTGAGTGGTCCCAGTGGGGGTATTTTAGACCTTGAATCTCCATTTCATAGGCATCAACAACAGACTCAGTTAGGTCATATGAATATGATAACTGGTTTGGAAAATGACAATAATCAAATTGGTTTAATTGAAGTGAAAAATTTGAATTTTGGTAAAGGAAAGGGAATTGCTAGTTCTAATCATGATAATAGTAATGATATGAGCGAAGACGATGAACATGGTTACGGAGAAGATGGGAATTGCGAGAATTTTTTCGATGGTGGGAAAGGGAAAAAAGGGTCTCCCTGGCAGCGAATGAAGTGGACAGATAATGTGGTTGGGCTTCTTATAGCAGTGGTGAGTTGTGTTGGTGATGATGGAACAATTGCTGGTGTGGATGGTGTTAAGAGGAAACCCGGGGTTGTACAGAAGAAGGGTAAGTGGAAAACTGTTTCTAAGATAATGATAAGTAAAGGTTGTCATGTGTCGCCGCAGCAGTGTGAGGATAAGTTCAATGACTTGAATAAGAGGTATAAGAGGTTGAATGAGATACTTGGTAGGGGAACTTGTTGTCAGGTGGTCGAGAATCCTGCATTGATGGATTCAATGGTTAACTTGTCTGCTAAGGCTAAGGATGATGTTAGAAAGATATTGAGCTCGAAACATTTGTTTTATAAGGAAATGTGTGCATACCACAATGGTCAAAGGATACCAAATAGTCATGATCTTGACTTGCATAGTTATTCGTTGGAACACGGGAAGGACTCGAGAGATCACGATGGCTCTGATGACGAAGATGAAGATAACAATGAAAGTGAGGATGATGAGTTGGATAATGGAATTAATATTAATGCACGTGGTCATGGAGGGAGGATGGAAGGGTTTTGTGATAGAAATAAATTAAGTGAGGAGGATGGCAACTTTTGGCCGCAGTCTATTGGGATGAAGAAACTTGAGAGTGAAATGGCAAGGGTTTTTCAAGACCCTGCAAAGTCACCGTGGGAGAAAAGAGAGTGGATTAAGCAACAGCTGTTGCAGCTCCAAGAGCAAAATGTTGACTTCCAAGCCAGGGCTTTTGAACTTCAAAAACAGCGGTTTAAGTGGTTAAGATACCGCAGCAAGAAGGATAGGGAGCTGGAGAAGCTGGCGATGGAGAACAAGAGAATGAAATTTGAAAATGAGCACAGGATCTTAAAGCTGAAGCAGAGAGAGCAGGAGGCAGAGCTCAGTAGGTCTGAGATGTCCTTAGACCCTACCTCCATTGGTATCAAGAGGCCACTAGGGAGGGAACATATCAACTTGGCTAGACAGCACTAG 1326 0.4208 MNGSGLGGGFLSGPSGGILDLESPFHRHQQQTQLGHMNMITGLENDNNQIGLIEVKNLNFGKGKGIASSNHDNSNDMSEDDEHGYGEDGNCENFFDGGKGKKGSPWQRMKWTDNVVGLLIAVVSCVGDDGTIAGVDGVKRKPGVVQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNEILGRGTCCQVVENPALMDSMVNLSAKAKDDVRKILSSKHLFYKEMCAYHNGQRIPNSHDLDLHSYSLEHGKDSRDHDGSDDEDEDNNESEDDELDNGININARGHGGRMEGFCDRNKLSEEDGNFWPQSIGMKKLESEMARVFQDPAKSPWEKREWIKQQLLQLQEQNVDFQARAFELQKQRFKWLRYRSKKDRELEKLAMENKRMKFENEHRILKLKQREQEAELSRSEMSLDPTSIGIKRPLGREHINLARQH 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03990 441 Coils Coil 347 367 - -
Mepo6g03990 441 MobiDBLite consensus disorder prediction 67 86 - -
Mepo6g03990 441 Pfam Myb/SANT-like DNA-binding domain 108 233 IPR044822 -
Mepo6g03990 441 MobiDBLite consensus disorder prediction 264 281 - -
Mepo6g03990 441 Gene3D - 111 183 - -
Mepo6g03990 441 PANTHER F16F4.11 PROTEIN-RELATED 1 414 - -
Mepo6g03990 441 MobiDBLite consensus disorder prediction 254 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03990 Mepo-Chr6 52122417 52124328 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo6g03990 Myb_DNA-bind_4 4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03990 - - psat:127087226 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03990 6 52122417 52124328 Mepo6g03990 6 52122417 52124328 ECH