Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03965 ATGCATGGATTAACTCTCCCTCTTAACATGTTCCTTTCTCTCCGATTTCTTCAACCATCTTCATGCTTCCCAAACCAAACGAGTTCTTTAATTTCCATACCTAGTTGCAGAATCAGCCATGGAAGATGTGTGCTCAATTATTCAAGCTTTTACACCAACAAAAAGCAGCATGGAAGAGGTGGCAATAGAATGAGGGTAGCTGTGAGAGCAAAGCGTGGTGAGTCTCCTTACGAAGTTCTTGGTTTGTCTCCATCTGCATCTGTGAATGAAATCAAAAAGGCTTATAGGAAACTTGCTCTTAAGTATCATCCTGATGTTAATAAAGAGGACAATGCACAGGAGAAATTTTTGAGGATAAAACATGCATACAATACGTTGCTAAATTCTAGTTCCCGCAGAAAGTATGATTCTGGAAATCGTGGTTCTAATTCTTCTCAAAGAAGCCAGAGTTGGAATCAGCAAGTTGAAGAAGAATTTTATGGATTAGGAGACTTCTTTAAGGATCTTCAAGAAGAATTCAAGAACTGGGAAGCCAGTGCGGCTTCACAAGGAAAGCCGAAGAGCCTATGGGAGGAGTTGTCGGAAATAGGCGAAGAATTTGTGGAGTTCCTCGAGAAAGAACTCAATATTGTTGATTCAAATGAAAGTCCTCGGGGAGGAAATTCATCTAATTTATATGAGACAGAGACACCAAGCAACAACACTCAAGGTGGAGCTAGCAAGGGAAACACAAGTGTTGAGGATAACCTTGATGAAATTGAAGCCACTCTAGCTCGGTTAAAAAAGGAGTTAGGCTTATAG 801 0.4045 MHGLTLPLNMFLSLRFLQPSSCFPNQTSSLISIPSCRISHGRCVLNYSSFYTNKKQHGRGGNRMRVAVRAKRGESPYEVLGLSPSASVNEIKKAYRKLALKYHPDVNKEDNAQEKFLRIKHAYNTLLNSSSRRKYDSGNRGSNSSQRSQSWNQQVEEEFYGLGDFFKDLQEEFKNWEASAASQGKPKSLWEELSEIGEEFVEFLEKELNIVDSNESPRGGNSSNLYETETPSNNTQGGASKGNTSVEDNLDEIEATLARLKKELGL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03965 266 Pfam DnaJ domain 76 136 IPR001623 -
Mepo6g03965 266 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 32 206 - -
Mepo6g03965 266 MobiDBLite consensus disorder prediction 214 250 - -
Mepo6g03965 266 FunFam Chaperone DnaJ-domain superfamily protein 72 182 - -
Mepo6g03965 266 SUPERFAMILY Chaperone J-domain 22 135 IPR036869 -
Mepo6g03965 266 PRINTS DnaJ domain signature 77 95 IPR001623 -
Mepo6g03965 266 PRINTS DnaJ domain signature 95 110 IPR001623 -
Mepo6g03965 266 PRINTS DnaJ domain signature 111 131 IPR001623 -
Mepo6g03965 266 MobiDBLite consensus disorder prediction 130 152 - -
Mepo6g03965 266 ProSiteProfiles dnaJ domain profile. 75 139 IPR001623 -
Mepo6g03965 266 MobiDBLite consensus disorder prediction 212 250 - -
Mepo6g03965 266 Coils Coil 243 263 - -
Mepo6g03965 266 SMART dnaj_3 74 131 IPR001623 -
Mepo6g03965 266 Gene3D DnaJ domain 73 182 IPR036869 -
Mepo6g03965 266 CDD DnaJ 76 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03965 Mepo-Chr6 51940479 51945061 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03965 77 137 C2H2 Transcription Factor Family AT1G74250 41.791 2.57e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03965 - - gmx:100812972 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03965 6 51940479 51945061 Mepo6g03965 6 51940479 51945061 ECH