Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03956 ATGGAATGCATCACTTTTGAGACGAATGGTGGTTCATATCAGGGTCTCCCAAAAAAACCATTTGATGCTAGGGGTGTATATGTAGCTCCTGGCTTGAGAGGTGGTGCAGGGTCAGACATGAGGCGGAACATTGAGAATTATGTGCGGGTAACCAACCTCTCGAAGAACACGAGGGAGCCTGACTTGTATGAGCTATTCAGTCCTTTTGGTTTTGTGAGCAAAGTCTATATTTCTATTGATAAAAATACTAGCATGTGTAGGGGGTCTGGCTATGTCACCTTTGTCAGCAAGGAAGATGCTCAGATAGCTATGAACAAACTCAATGGCTATAGCTACAATAATCTCATCTTGAGGGTTGAATGA 363 0.4325 MECITFETNGGSYQGLPKKPFDARGVYVAPGLRGGAGSDMRRNIENYVRVTNLSKNTREPDLYELFSPFGFVSKVYISIDKNTSMCRGSGYVTFVSKEDAQIAMNKLNGYSYNNLILRVE 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03956 120 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 27 120 - -
Mepo6g03956 120 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 48 114 IPR000504 GO:0003723
Mepo6g03956 120 CDD RRM_eIF3G_like 48 120 IPR034240 -
Mepo6g03956 120 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 46 120 IPR000504 GO:0003723
Mepo6g03956 120 Gene3D - 23 120 IPR012677 -
Mepo6g03956 120 SMART rrm1_1 47 120 IPR000504 GO:0003723
Mepo6g03956 120 SUPERFAMILY RNA-binding domain, RBD 26 120 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03956 Mepo-Chr6 51864494 51864856 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03956 11 120 Eukaryotic Initiation Factors Gene Family AT3G11400 58.621 2.60e-40 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03956 K03248 - csav:115719292 136.346