Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03953 ATGCTTTCTCCAAACACCTTTCTGCAAGATTTTAGTGTTCCAAACTCGGTAAACCAAGTAACAAATGGGTTTGAGTTAGAAGATTCATCATCTTCACCTTCTTCTGGCACAAACTCAAGTGGAGAATCCTTGGAAATGACAAGATATTCCAATAACATCCTAAGATACATAAATGACATCCTCATGGATGAAGAAGATGACTTGGAGCAAAAACCTTGCATGTTGCAGGAATGTTTAAGACTTCAGGCCGCTGAAAAGTCCTTCTATGATGTTCTTGGCCATAACCAGTCTTCACCAAATGATAGCACTGACCCAGATGGAAATTTCGATCGCGCTGCTAGTTTTGAGAGAAGTGGCAGCAGCTGCATCGCTGACAACTCATATGAATCTAACTGGGTCAACCATGTCATCGAATTCGAATCTTCTTCCATACAACTACAAAGTCCTTTAATAGAAAAAAACTACTGTGACTTGACAGAAGCTGATCCAGTTGTCATCGAGACACAAGGTGCTAACCATTGTCACAACGGAACTTGGAGTTGGAATGACATTCAGCCAGTGACGGTGGAAGAAGTTTCACCTTCAACAGTACCAGAAAAAAGAAGTCATAAGATGGATAATGATAATGATACTTGTAATGAACAAGAGGGAAGAGGTAGCAAGGTTTCAGCTATTTTCTCTGATGAATTAGAGCCACCAGAGATTTTAGATGAGGTGCTGCTTTATCAGACAGGAAAGACTCTCACTCAACACCAACAAGCATCTTATAATCTTGATTCAGGAGGAAAGGCAAAGGAAACACATTTGCGTTTGAAGAAAGCATCTACTACGAACAATGTTGCGGCTGTTGATTTGTGGACCATGCTAAATCAATGTGCACAAGCTGTGGCGAGCTACGATCAAAGGAATACAGATGAGCTACTCAAACAGATTAGGCAACACTCTTCGCCTTTTGGCAATGGACTCCAACGTTTAGCTCATTACTTTGCTAATGGTCTTGAGATAAGATTGGCTGCTGAGACGCCATCATATCAGCCTCTTGGTTTGGCAACTGCTGGAGATATGTTGAAAGCTTACAAACTATTTGTTACTGCGTCTCCTTTGCAGAGAATGACAAATGCTTTGCTAACCAAAACGATTTTCAAAATAGTGAAGAACGAGAGCAGCGTTCATGTTATTGATTTTGGAATTTTCTATGGTTTCCAGTGGCCATGCCTCGTCAGAAAACTTTCATTAAGACCTGGTGGTCCTCCAAAGCTTCGAATTACAGGAATTGAGCTTCCTCAGCCAGGATTTAGACCTGCAGAAAGGGTGGAGGAAACTGGACGGCGTCTAGCAAACTACTGCAAGAAGTTCAATGTACCATTTGAATACAACTTCATTGCACAGAAATGGGAAACCATCCGTCTCAAGGATCTCAAGATAGACAGGAATGAAATAACTCTTGTTAGCTGTTTGTACAGACTGAAGAACCTTCCTGATGAAACTGTGGCATTGAATTGTCCAAGAGAAGCTGTGTTGAAGCTGATCAGGAAGATTAATCCAAAAGTCTTCTTCCATGGAGTTGCCAATGGAAGTTATAGCGCACCGTTTTTCCTGACTCGGTTTAAGGAAGCACTCTACCACTTCTCATCGCTGTTTGATATGTTTGAGGCTAACGTGCCTCGTGAAGACACGCAGAGGTCGATGCTTGAGAGAGGGTTGTTTGGAAGGGATGCTATAAATGTTATAGCTTGTGAGGGAGCAGAAAGGGTTGAAAGGCCTGAGACGTACAAGCAGTGGCAGGTCAGGAACAAGAGAGCTGGGTTCAAGCAAATCAGGTTGGATTCTGATTTGGTGAATGAAACCAAAGCAATGGTGAAGAAGGAATACCATAAAGATTTTACAGTCGATGTGGATGGTAAGTGGGTTTTAAAGGGATGGAAAGGACGCATTTTGAATGCTTTATCTGCTTGGGTTCCTGCTTAA 1968 0.4202 MLSPNTFLQDFSVPNSVNQVTNGFELEDSSSSPSSGTNSSGESLEMTRYSNNILRYINDILMDEEDDLEQKPCMLQECLRLQAAEKSFYDVLGHNQSSPNDSTDPDGNFDRAASFERSGSSCIADNSYESNWVNHVIEFESSSIQLQSPLIEKNYCDLTEADPVVIETQGANHCHNGTWSWNDIQPVTVEEVSPSTVPEKRSHKMDNDNDTCNEQEGRGSKVSAIFSDELEPPEILDEVLLYQTGKTLTQHQQASYNLDSGGKAKETHLRLKKASTTNNVAAVDLWTMLNQCAQAVASYDQRNTDELLKQIRQHSSPFGNGLQRLAHYFANGLEIRLAAETPSYQPLGLATAGDMLKAYKLFVTASPLQRMTNALLTKTIFKIVKNESSVHVIDFGIFYGFQWPCLVRKLSLRPGGPPKLRITGIELPQPGFRPAERVEETGRRLANYCKKFNVPFEYNFIAQKWETIRLKDLKIDRNEITLVSCLYRLKNLPDETVALNCPREAVLKLIRKINPKVFFHGVANGSYSAPFFLTRFKEALYHFSSLFDMFEANVPREDTQRSMLERGLFGRDAINVIACEGAERVERPETYKQWQVRNKRAGFKQIRLDSDLVNETKAMVKKEYHKDFTVDVDGKWVLKGWKGRILNALSAWVPA 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03953 655 MobiDBLite consensus disorder prediction 23 44 - -
Mepo6g03953 655 MobiDBLite consensus disorder prediction 196 215 - -
Mepo6g03953 655 MobiDBLite consensus disorder prediction 195 219 - -
Mepo6g03953 655 Pfam GRAS domain family 287 652 IPR005202 -
Mepo6g03953 655 MobiDBLite consensus disorder prediction 92 113 - -
Mepo6g03953 655 MobiDBLite consensus disorder prediction 92 107 - -
Mepo6g03953 655 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 220 646 IPR005202 -
Mepo6g03953 655 ProSiteProfiles GRAS family profile. 276 653 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03953 Mepo-Chr6 51852020 51853987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03953 49 654 GRAS Transcription Factor Family AT2G29060 42.072 1.46e-163 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo6g03953 GRAS 2.6e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03953 - - cam:101504630 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03953 6 51852020 51853987 Mepo6g03953 6 51852020 51853987 ECH
Mepo6g03953 6 51852020 51853987 Mepo2g02077 2 30147879 30150578 PCT