Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03949 ATGGATCCGAATTTTGTCGGATTCCAAACCCCCTACAAATTTGATGACCATGGTAACCTAATCCTTCTCTCTGATCCAAATCCAAACCTTAACGATTTCACCATCACCAACCCTTATGCGGGCCCACCCAATTCGGAGCCACTCGTTTTTTCTTCTGATGCAACCAAAGATTCTACCTTTGAAGATGCTGATTTTTCAGAAACAGTGAAATATATAAGCCAGATTCTAATGGAAGAAGATTTTGAACAAAAACCATGTATGTGTTATGACCCACTTAGTCTTCAACATACTGAGAAAATTTTCTTTGATGCTTTAGAATCAAATTTGCCTCTTTCACCTAATCAACACCCTCTTGATGTTCTTGAGATTCCTAGTAGCAATTGTTGTCTTCCTACTGATTCTGGCAATAGTTCTAGTTCTAATGAGTTAAAGCCTCTTTCACCTGATACCCCAGTTTCTGGTGGTGATTCTGGTTTTAATTCAGTGAAGTCTCAGTTTATTGTTCCAAATCATAGTTTGAATTTGAGTAATAGTAATATTAGTGATGGTGTTTTTGATTTGGATTCTTCTGAGACTAGGGTTATGGCTCAGAATATTTTTAGTGATGCTGATTCTATTTTGCAGTTTAGAAAAGGGTTAGAGGAAGCTAGCAAGTTTCTTCCACAAAAAGCTCAGCTTTTTACTGGTTTTGAGAATGCTAGTGATAATTTAGTGTCTCATGAGCCTAAGGGTAGGGTTGGAGTGATCAAGATGGAGGGTGTTGTTAGGGAGAACTCGAATTCGAGTTATTCGAGTTCAAATTCGAATTCGGGTTATTCGAATTCACATGGTTTGTTGAAGAGTAGAAAGAATCACGAGCGTCAAGAAAGTGACGATGAAGAAGGAAGAAGTAACAAGCAGTCTGCGGTTTCCGTTGAGGAGAGTGAAATATCTGATATGTTTGATAGGGTTTTACTTAGTGTTGAAAATGTGCCATTGTGTGCTGAACAAAAGGATGGATCAGTGGTGGAGAGTAGAACACGGGTTGGTGAACTTGATGGAGGGAAGGCGCGTTCGAAGAAACAAGGGAGGAAGAGGGATGCTGTGGATTTGAGGACCCTTTTGGTTCTGTGTGCACAAGCTGTATCTGCTAATGACAATAGGACTGCTAATGAATTGTTGAAGCAGATTAGGAAGCATTGTTCTCCTTCAGGTGATGCATCACAGAGAATGGCTCATTACTTTGCGAATGCGATTGAAGCGCGCATGGTTGGTGCTGGTACCGGTACACAAATATTATATATGAGCCAAAAGATGTTTAGTGCTGCTGATTTCTTGAAAGCTTACCAAGTTTTTATTTCTGCTTGCCCTTTCAAAAAATTTGCGCATTTCTTTGCAAATAAAATGATATTGAAAACAGCTGAAAAGGCAGAAACCCTTCACATTATTGATTTTGGTATCTTATATGGTTTCCAATGGCCAATTCTTATTAAGTTTTTGTCAAAAGTAGAGGGTGGACCACCCAAGTTGAGGATCACAGGAATTGAGTATCCCCAAGCTGGCTTTCGACCGGCAGAGAGAATCGAGGAAACTGGCCGGCGTTTAGCTAACTATTGTGAACGTTTCAATGTTTCCTTCGAATACAAGGCCATACCATCACGAAATTGGGAAACCATTCAAATTGAAGACCTTAATATTAAGAGCAATGAGGTAGTGGCTGTGAACTGTTTGGTAAGGTTTAAGAATTTACATGATGAGACAATCGACGTGAACAGTCCTAAAGATGCAGTTCTGAAGTTAATCAGGAACATAAATCCGCGCATATTTGTTCAATCCATCGTAAATGGGTCTTATAATGCCCCTTTCTTTTCCACACGCTTCAAGGAGTCACTTTTCCATTATTCTGCAATGTTTGATATGTATGATACTCTCATATCCCGTGAAAATGAATGGAGGTCGATGATTGAGAGAGAGTTTTTGGGCCGGGAGATTATGAATGTTGTAGCATGTGAAGGTTTTGAGAGGGTTGAGAGGCCCGAGACATACAAACAGTGGCAGGTTAGGAATCTAAGGGCTGGCTTTAGGCAACTCCCTCTGGATAAGGAGGTAATGGTCAGCTTTAGAGATAAGCTAAGACAATGGTACCATAAAGATTTTGTCTTTGATGAAGATAACAACTGGATGCTTCAAGGTTGGAAAGGCCGAATTATGTATGCTTCAGCTGGTTGGGTGCCAGCATAA 2220 0.4009 MDPNFVGFQTPYKFDDHGNLILLSDPNPNLNDFTITNPYAGPPNSEPLVFSSDATKDSTFEDADFSETVKYISQILMEEDFEQKPCMCYDPLSLQHTEKIFFDALESNLPLSPNQHPLDVLEIPSSNCCLPTDSGNSSSSNELKPLSPDTPVSGGDSGFNSVKSQFIVPNHSLNLSNSNISDGVFDLDSSETRVMAQNIFSDADSILQFRKGLEEASKFLPQKAQLFTGFENASDNLVSHEPKGRVGVIKMEGVVRENSNSSYSSSNSNSGYSNSHGLLKSRKNHERQESDDEEGRSNKQSAVSVEESEISDMFDRVLLSVENVPLCAEQKDGSVVESRTRVGELDGGKARSKKQGRKRDAVDLRTLLVLCAQAVSANDNRTANELLKQIRKHCSPSGDASQRMAHYFANAIEARMVGAGTGTQILYMSQKMFSAADFLKAYQVFISACPFKKFAHFFANKMILKTAEKAETLHIIDFGILYGFQWPILIKFLSKVEGGPPKLRITGIEYPQAGFRPAERIEETGRRLANYCERFNVSFEYKAIPSRNWETIQIEDLNIKSNEVVAVNCLVRFKNLHDETIDVNSPKDAVLKLIRNINPRIFVQSIVNGSYNAPFFSTRFKESLFHYSAMFDMYDTLISRENEWRSMIEREFLGREIMNVVACEGFERVERPETYKQWQVRNLRAGFRQLPLDKEVMVSFRDKLRQWYHKDFVFDEDNNWMLQGWKGRIMYASAGWVPA 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03949 739 MobiDBLite consensus disorder prediction 258 278 - -
Mepo6g03949 739 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 285 731 IPR005202 -
Mepo6g03949 739 MobiDBLite consensus disorder prediction 131 155 - -
Mepo6g03949 739 MobiDBLite consensus disorder prediction 279 300 - -
Mepo6g03949 739 MobiDBLite consensus disorder prediction 258 308 - -
Mepo6g03949 739 ProSiteProfiles GRAS family profile. 355 737 IPR005202 -
Mepo6g03949 739 Pfam GRAS domain family 364 736 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03949 Mepo-Chr6 51819006 51821711 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03949 68 739 GRAS Transcription Factor Family AT1G07530 48.559 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo6g03949 GRAS 1.2e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03949 - - cam:101504630 1169.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03949 6 51819006 51821711 Mepo2g02075 2 30134786 30135241 PCT
Mepo2g02076 2 30135347 30136677 Mepo6g03949 6 51819006 51821711 PCT