Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03948 ATGGACAAAAGAGTTGTTGATTCACACCATGAACAAAGTAAGAGTGTATTCACTTCCACTGTTCTTGGTTTTATAAACAAATTTCTCATGGAAGATGATGACATAGAGGAAGACTACAATATGTTCCAACACAATGAACATGAGGAGTCTTCCACTGTTCTTGGTTCTATAAACCAATTTCTCATGGAAGAAGACTTTGAAAAAGAGTACACTATGTTCCAAGATTCCTTTGCTCTTCAACTTACTGAAAAATCATTTCATGATGTTATTGCTCACACTCCTCTTCCTCCTCCTCCTCCTCCTATTGCTACAACTACTACTTTTCCTTCTTCTTTCATCCAGCATGAGCATCAACAAAACTACAACTTTGTGGATAGCCCTAACTTCAGTGATTCTAGTTTCAGCAGTGGTAGCACTAGCTCCTTTGAACTTGATCCAATTATAGACTCATACAACTACAATTACAACCCTTTTCTACTCCCAAATACTCCTCCATTTTCTCCTAATAACTTTGTTTTTCAATCTACTTCAACCTTTTTCCCTTCTTTCAATAATGCTCTTTCTCATGAGGTACTTCAGACAGAAAACTTTGAAGAAGAGCATTTTCTCAACGTGTCACAAAATGGATCAGAACAAGTGTATGTAGATGCTAGCAATGAGTTATCAGAATTATTTGATAAAGTACTAGTTCTTGGTACTAAATTCACAAAAGGGCCACTTCAAAACACAAGCTTCCAGCAGAATGAAGAATTATCAAACAGATTCTATGGTTCTAGGAAACGAAGTTATGAGGAAGTTGTGGATTTGAGGACACTATTGATGCTGTGTGCACAATCCATTTCTTGTAATGATATTTCAAATGCTAACCAATTATTAAACCAGATTAAGAAACATTCTTCTACAACAGGTGATGGTACTCAAAGATTGGCACATTTCTTTGGGAATGCACTTGAAGCACGTTTAGCAGGAACTGGTTCACATATCTATAGAGCTCTATCTTCCAAGAAAAAATCTGCCGCAGATATGGTCAAAGCTTACCAAGTTTATTCATCTGCATGCCCTTTTGAAAAACTTGCAATTATGTTCTCAAACGATGCAATTTTGAATGTAGCCAAAGAAACAGAAAGTCTTCACATTATAGATTTTGGTGTTGGTTATGGTTTCAAGTGGCTTGGTTTTATATATCGTTTATCGAAAAGATCTGGTGGGCCACCCAAGTTGAGGATCACAGGGATAGATCTTCCAAATTCATTGGAGAGAGTGAATGAAACAGGTCTTAGGCTTGCAAGTTATTGCAAACGTTTCAATGTTCCTTTTGAGTACAATGGTATTGCAAAAAATTGGGAAAGTATCAAAGTTCAGGATTTTAAGATAAGGAAAAATGAGTTTGTTGCTGTGACTTGTGTGTTTAAGTTTGAGAATCTACCTGATGAGACAGTTGTTTCGGAGAATCCGAGGGGTGCTGTTTTGGATTTGATTAAGAAGGCAAATCCGAATATATTTATTCATAGCATTGTTAATGGTGGTTATGATGCACCTTTTTTTGTGACAAGGTTTAAGGAAGCTGTTTTTTATTATTCAGCATTGTTTGATATGCTTGATAACAACAATGTTGAACTCGAGGATCCTGTTAGGTTGATGTTTGAGGAAGACGTTTGGGGGAAAGATATAATGAATGTTATAGCCTGTGAAGGTTGTGATAGGGTTGAGAGGCCAGAGACATATATGCAATGGCATTCTAGGCATAGAGGAAATGGTTTTAGGTCTTTGAAATTGGATAAGCAGATTATAAATAAATTGAAGGGTAGGTTGAGAGATGATGCATACAATAGTGATTTTCTGTTTGAGGTGAAGGAAAATTGGATGCTACAAGGTTGGAAGGGTAGAATTCTATATGGTTCTTCTTGTTGGATTCCAGCATAG 1923 0.3651 MDKRVVDSHHEQSKSVFTSTVLGFINKFLMEDDDIEEDYNMFQHNEHEESSTVLGSINQFLMEEDFEKEYTMFQDSFALQLTEKSFHDVIAHTPLPPPPPPIATTTTFPSSFIQHEHQQNYNFVDSPNFSDSSFSSGSTSSFELDPIIDSYNYNYNPFLLPNTPPFSPNNFVFQSTSTFFPSFNNALSHEVLQTENFEEEHFLNVSQNGSEQVYVDASNELSELFDKVLVLGTKFTKGPLQNTSFQQNEELSNRFYGSRKRSYEEVVDLRTLLMLCAQSISCNDISNANQLLNQIKKHSSTTGDGTQRLAHFFGNALEARLAGTGSHIYRALSSKKKSAADMVKAYQVYSSACPFEKLAIMFSNDAILNVAKETESLHIIDFGVGYGFKWLGFIYRLSKRSGGPPKLRITGIDLPNSLERVNETGLRLASYCKRFNVPFEYNGIAKNWESIKVQDFKIRKNEFVAVTCVFKFENLPDETVVSENPRGAVLDLIKKANPNIFIHSIVNGGYDAPFFVTRFKEAVFYYSALFDMLDNNNVELEDPVRLMFEEDVWGKDIMNVIACEGCDRVERPETYMQWHSRHRGNGFRSLKLDKQIINKLKGRLRDDAYNSDFLFEVKENWMLQGWKGRILYGSSCWIPA 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03948 640 Pfam GRAS domain family 269 637 IPR005202 -
Mepo6g03948 640 ProSiteProfiles GRAS family profile. 260 638 IPR005202 -
Mepo6g03948 640 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 212 631 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03948 Mepo-Chr6 51811917 51813839 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03948 50 639 GRAS Transcription Factor Family AT2G29060 42.512 1.80e-170 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo6g03948 GRAS 2.2e-102 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03948 - - mtr:11408919 1152.12