Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03947 ATGGACAAAAGAGTTGTTGATTCACACCATGAACAAAGTAAGAGTGAATTCACTTCCACTGTTCTTGGTTTTATAAACAAATTTCTCATGGAGGATAATGACATAGAGGAAGACTACAATATGTTCCAACACAATGAACATGAGGAGTCTTCCACAGTTCTTGGTTCTATAAACCAATTTCTCATGGAAGAAGACTTTGAAAAAGAGTACACTATGTTCCAAGATTCCTTTGCTCTTCAACTTACTGAAAAATCATTTCATGATGTTATTGCTCACACTCCTCTTCCTCCTCCTGCTACTGCTGCTGCTGCTGCTGCTGCTACTACTACTCTTCCTTCTTCTATTTCTTCCTCGTCTTCCATCCGGCATCAACAAAACTACAACTTTGTGGATAGCCCTAACTTCAGTGATTCTAGTTTCAGCAGTGGTAGCACTAGCTCCTTTGAACTTGAACCAGTTATAGAGACATACAACTACAATTACAACACTTTTCCACTCCCAAATACTCTTCCAATTCCTCCAAACTTTGTTTCTCAATTCGACTCAACCGTTTTCCCTTCTTTCAACAATGCTCTTTCTCATGAGGTAATTAAGACAGAAAACTTTGAAGAAGAGCATTTTCTTAATGTGTCACAAAAAGAGTCAGAACAAGTATATGTAGATGATAACAGTGAGTTACCAGAATTATTTGATAAATTACTAGTCCTTGGTACTAAAGTAAAAAAAGGGCCACTTCAAAACACAAGCTTTCAGCAGAATGATGAATTATCAAACAGATTCTATGGTTATAGGAGACAGAGAAGTTATGAGGAAGTTGTGGATTTGAGGACACTATTGATGTTGTGTGCACAATCCATTTCTTGTAATGATATTTCAAATGCTAACCAATTATTAAACCAGATTAAGAAACATTCTTCTCCAACAGGTGATGGAACTCAAAGATTGGCACATTTCTTTGGAAATGCGCTTGAAGCACGTTTAGCAGGAACTGGTTCACAAATCTATAGAGCTCTATCTTCCCAGAAAAAATCTGCTGCAGATATGGCAAGAGCTTACCAAGTTTATTCATCAGCATGCCCTTTTGAAAAGCTTGCAATTATGTTCTCAAATAATGCAATTTTTAATGTAGCAAAAGAAACAGAAAGTCTTCACATTATAGATTTTGGTGTTGGTTATGGTTTCAAGTGGCCTGGTTTAATACATCGTTTATCGAAAAGATCTGGCGGGCCACCCAAATTGAGGATCACAGGGATAGATCTTCCAAATTTGTTGGAGAAAGTGAATGGAACAGGTCTTCGTCTTGCAACTTATTGCGAGCGTTTCGGTGTTCCTTTTGACTTCAATGGTATTGCAAAAAATTGGGAAAGTATCAAAGTGAAGGATTTGAAGATAAGGAAAAGTGAGTTTGTTGCAGTGAATTGTTATTTTAAATTTGAGAATCTACTTGATGAGACAGTTGCTTCGGAGAATCCCAGGGGTGCTGTTTTGGATTTGATTAAGAAGGCAAATCCGAATATATTTGTTCATAGCATTGTTAATGGTAGTTATGATGCACCTTTTTTTGTGACAAGGTTTAAGGAAGCTGTTTTTCATTACTCAGCATTGTTTGATATGCTTGATAACAACAATGTTGAACGTGAGGATCCTAATAGGTTGATGTTTGAGGAAGAGTTTTGGGGGAAGGATATAATGAACGTTATAGCTTGTGAAGGTTGTGATAGGGTTGTGAGGCCAGAGACATATAGGCAATGGCATTTTAGGCACATGGGAAATGGGTTTAAGTCGTTGAAATTGGATAAGCATGTTATAGATAAATTGAAGGATTTGTCTCGGAGGAATACGTCTCAGAGACCGCCTGAGCCGCCTCAGGATAGGAGTGACAGATTTAGGGCAGAGAGGCCTGCCCCTACTGGTAGCTTTCAGAGGGAGAAACAAGCATTACACCCTCCTATGGCTGGTCGAGGGAGAGGTGGGGGAATGAGACTTGGTAGCGTTGATGCTGCTGGGGGATCAACGTCACAGACGGGTCCATCCCAGACGGTGGACCCGACACAGTATCAGCAGGATTATCAGGTGTATGAGCAGGCGCATGCATAG 2097 0.3948 MDKRVVDSHHEQSKSEFTSTVLGFINKFLMEDNDIEEDYNMFQHNEHEESSTVLGSINQFLMEEDFEKEYTMFQDSFALQLTEKSFHDVIAHTPLPPPATAAAAAAATTTLPSSISSSSSIRHQQNYNFVDSPNFSDSSFSSGSTSSFELEPVIETYNYNYNTFPLPNTLPIPPNFVSQFDSTVFPSFNNALSHEVIKTENFEEEHFLNVSQKESEQVYVDDNSELPELFDKLLVLGTKVKKGPLQNTSFQQNDELSNRFYGYRRQRSYEEVVDLRTLLMLCAQSISCNDISNANQLLNQIKKHSSPTGDGTQRLAHFFGNALEARLAGTGSQIYRALSSQKKSAADMARAYQVYSSACPFEKLAIMFSNNAIFNVAKETESLHIIDFGVGYGFKWPGLIHRLSKRSGGPPKLRITGIDLPNLLEKVNGTGLRLATYCERFGVPFDFNGIAKNWESIKVKDLKIRKSEFVAVNCYFKFENLLDETVASENPRGAVLDLIKKANPNIFVHSIVNGSYDAPFFVTRFKEAVFHYSALFDMLDNNNVEREDPNRLMFEEEFWGKDIMNVIACEGCDRVVRPETYRQWHFRHMGNGFKSLKLDKHVIDKLKDLSRRNTSQRPPEPPQDRSDRFRAERPAPTGSFQREKQALHPPMAGRGRGGGMRLGSVDAAGGSTSQTGPSQTVDPTQYQQDYQVYEQAHA 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03947 698 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 209 609 IPR005202 -
Mepo6g03947 698 MobiDBLite consensus disorder prediction 667 698 - -
Mepo6g03947 698 MobiDBLite consensus disorder prediction 607 698 - -
Mepo6g03947 698 ProSiteProfiles GRAS family profile. 266 642 IPR005202 -
Mepo6g03947 698 Pfam GRAS domain family 275 614 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03947 Mepo-Chr6 51801178 51805245 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03947 50 607 GRAS Transcription Factor Family AT2G29060 44.828 7.95e-160 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo6g03947 GRAS 6.7e-96 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03947 - - mtr:11408919 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03947 6 51801178 51805245 Mepo6g03947 6 51801178 51805245 ECH
Mepo6g03947 6 51801178 51805245 Mepo2g02074 2 30128834 30131481 PCT
Mepo2g02075 2 30134786 30135241 Mepo6g03947 6 51801178 51805245 PCT