Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03946 ATGGACAAAAGAGTTGTTGATTCACACCATGAACAAAGTAAGAGTGAATTCACTTCCACTGTTCTTGGTTTTATAAACAAATTTCTCATGGAAGATGATGACATAGAGGAAGACTACAATATGTTCCAACACAATGAACATGAGGAGTCTTCCACTGTTCTTGGTTCTATAAACCAATTTCTCATGGAAGAAGACTTTGAAAAAGAGTACACTATGTTCCAAGATTCCTTTGCTCTTCAACTTACTGAAAAATCATTTCATGATGTTATTGCTTACACTCCTCTTCCTCCTCCTACTACTGCTACTGCTGCTGCTACTACTACTCTTCCTTATCCTTCTTCCTCTTCTTCGTCTTCTTATTCTTCTTCTTCTTCCATCCAGCATCGACAAAACTACAATTATGTGCATAGCCCTAACTTCAGTGATTATAGTTTCAGCAGTAGTAGCACTAGCTCCTTTGAACTTGATCCAATTATAGACTCTTACCACTATAATAACAACACTTTTCTACTCCCAACTACACTTCCATTCCCTCCTAATCACATTTTTTCTCAATCCAATTCAACCCTTTTCCCTTCTTTCAATAATGCTCTTTCTCACGAGGTAATTAAGACACAAAACTTTGAAGAAGAGCATTCTCTTAATGTGTCAGAACAAGTGAATGTAGATGATAACAGTGAGTTATCAGAATTATTTGATAAATTACTTCTTGGTACTAAAGTCGCAAAAGGGCCACTTCAAAACACAAGCTTTCAGCAGAATGAAGAATTATCAAACAGATTCCATGCTGCTTCTAGGAGAAAGAGAAGTTATGAGGAAGTTGTGGATTTGAGCAAACTTTTAATGCTATGTGCCCAATCCATTTCTTGCAATGATATTTCAAATGCTAACCAATTATTAAACGAGATTAAGAAACATTCTTCTCCAACAGGTGATGGAACTCAAAGATTGGCACATTTCTTTGGAAATGCGCTTGAAGCACGTTTAGCAGGAACTGGTTCACAAATCTATAGAGCTCTATCTTCCCAGAAAAAATCTGCTGCAGATATGATAAGAGCTTACCAAGTTTATTCATCAGCATGCCCTTTTGAAAAACTTGCAATTATTTTCTCAAACAATGCAATTTTGAATGAAGCAAAAGAAACAGAAAGTATTCACATTATAGATTTTGGTATTGGTTATGGTTTCAAGTGGCCTGCTTTTATACACCGTCTATCGAAAAGATCCGGTGGGCCACCCAAATTGAGGATCACAGGGATAGATCTTCCAAATTCATTGGAGAGAGTGAACGAAACAGGTCTTAGGCTTGCAAGTTATTGCAAACGTTTCAATCTTCCTTTTGAGTTCAATAGTATTGCAAAAAATTGGGAAAGTATCAAAGTTGAGGACTTCAAGATAAGGAAAAATGAGTTTGTTGCTTTGAATTGTTTGCTTAAGTTTGAGAATCTACTCGATGAGACAGTAGTTTCGGAGAATCCGAAGGGTGCTGTTTTGGATTTGATTAGAAAGACAAATCCGAATATATTTATTCATAGCATTGTTAATGGTTGTTATGATGCACCTTTTTTTGTGACAAGGTTTAAGGAAGCTGTTTTTCATTATTCAGCATTGTTTGATACGCTTGATAACAACAATGTTGAACGTGTGGATCCTATTAGGTTGATGTTTGAGGAAGTGTTTTGGGGGAAGGATATAATGAATGTTATAGCTTGTGAAGGTTGTGATAGGGTTGAGAGGCCAGAGACATATAGGCAATGGCATTCTAGGCACATAGGAAATGGGTTTAGGTCTTTGAAATTGGATAAGCAGATTATAGATAAATTGAAGGGTAGGTTGAGAGATGATGCATATAGTAGTGATTTTTTGTTTGAGGTGAATGAAAATTGGATGCTACAAGGTTGGAAGGGTAGAATTCTATTTGGTTCTTCCAGTTGGGTTCCAGCATAG 1947 0.3647 MDKRVVDSHHEQSKSEFTSTVLGFINKFLMEDDDIEEDYNMFQHNEHEESSTVLGSINQFLMEEDFEKEYTMFQDSFALQLTEKSFHDVIAYTPLPPPTTATAAATTTLPYPSSSSSSSYSSSSSIQHRQNYNYVHSPNFSDYSFSSSSTSSFELDPIIDSYHYNNNTFLLPTTLPFPPNHIFSQSNSTLFPSFNNALSHEVIKTQNFEEEHSLNVSEQVNVDDNSELSELFDKLLLGTKVAKGPLQNTSFQQNEELSNRFHAASRRKRSYEEVVDLSKLLMLCAQSISCNDISNANQLLNEIKKHSSPTGDGTQRLAHFFGNALEARLAGTGSQIYRALSSQKKSAADMIRAYQVYSSACPFEKLAIIFSNNAILNEAKETESIHIIDFGIGYGFKWPAFIHRLSKRSGGPPKLRITGIDLPNSLERVNETGLRLASYCKRFNLPFEFNSIAKNWESIKVEDFKIRKNEFVALNCLLKFENLLDETVVSENPKGAVLDLIRKTNPNIFIHSIVNGCYDAPFFVTRFKEAVFHYSALFDTLDNNNVERVDPIRLMFEEVFWGKDIMNVIACEGCDRVERPETYRQWHSRHIGNGFRSLKLDKQIIDKLKGRLRDDAYSSDFLFEVNENWMLQGWKGRILFGSSSWVPA 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03946 648 Coils Coil 254 274 - -
Mepo6g03946 648 ProSiteProfiles GRAS family profile. 268 646 IPR005202 -
Mepo6g03946 648 Pfam GRAS domain family 278 645 IPR005202 -
Mepo6g03946 648 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 219 635 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03946 Mepo-Chr6 51790435 51792381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03946 50 647 GRAS Transcription Factor Family AT2G29060 42.424 2.04e-169 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo6g03946 GRAS 1.1e-102 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03946 - - mtr:11408919 1013.06