Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03931 ATGGTTTGTGCTTTACACTCGGTTACTAGATTAGGGTTAAATTCAAACAATAAGGTTTCCGTTGTATCAGTACCTCAGACCGCTCAAAGTGAGGGTGAGATCTTGCCGTCATCCACTTTAAAGAGTTATACCTATGCAGAACTCTCGACAGCCACTGGAAATTTTCGTCCAGATAATGTGTTAGGAGAAGGTAGTTTTGGAGCAGTTTTTAAGGGTTGGATTGATGAGAATTCATTGGCTGCTGCCACACCTGGGACTGGCACTGGCATTGTTATTGCTATCAAAAGTCTTAATCAAGAAAGCTTCCAAGGTCACAAGGAGTGGTTGGCTGAAGTCAACTACCTTGGAAGGTTTTCTCATCCTCGTTTAGTGAGATTGATCGGTTATTGCCTTGAAAGTGAACACCGTCTTCTCGTTTATGAGTTTATGCCTCGTGGAAGCTTGGAGAATCACTTGTTCAGGAGAGGATCATATTTTCAACCTTTTTCATGGAGCCTCCGTCTGAAGGTTGCTCTCGACGCTGCCAAAGGGCTTGCATTTCTGCACAGTGCTGAAAACAAAGTGATATATAGGGATTTTAAGACTTCAAATATCTTGTTGGATTCTGATTATAATGCAAAGCTTTCTGATTTTGGGCTGGCAAGGGATGGTCCAACAGGTGACAAAAGTCACATCTTCACCAACACGTTAGTGGGAAATAACGGATATGCAGCTCCTGAATATGTAGATTCAGGTCTTCTTACTACTAAGAGTGATGTCTATAGTTTTGGAGTTGTCCTGCTTGAAATGGTATGTGGTAGGAGGGTAATTAACAAGAATAAACCATATGGAGAACACCACTTGGTCCAATGGGCTAAACCGTATCTCACTGACAAACGCAAGGTTTTGAGGGTGTTAGACAGTCGGCTTGAAGGGCAGTGTTCAGCGGTTGAAGCCTATAAGGTAACCTCCCTTGCTTTGAAATGCCTATCAGAAAAATCCTTCAGGCCTAACATGGATGAAGTTGTTAGCACTTTGGAGCAGCTTGTGCACAAGAACCAAGCTTCTCTTAACATTTCTACCTGA 1065 0.4263 MVCALHSVTRLGLNSNNKVSVVSVPQTAQSEGEILPSSTLKSYTYAELSTATGNFRPDNVLGEGSFGAVFKGWIDENSLAAATPGTGTGIVIAIKSLNQESFQGHKEWLAEVNYLGRFSHPRLVRLIGYCLESEHRLLVYEFMPRGSLENHLFRRGSYFQPFSWSLRLKVALDAAKGLAFLHSAENKVIYRDFKTSNILLDSDYNAKLSDFGLARDGPTGDKSHIFTNTLVGNNGYAAPEYVDSGLLTTKSDVYSFGVVLLEMVCGRRVINKNKPYGEHHLVQWAKPYLTDKRKVLRVLDSRLEGQCSAVEAYKVTSLALKCLSEKSFRPNMDEVVSTLEQLVHKNQASLNIST 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03931 354 ProSiteProfiles Protein kinase domain profile. 55 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03931 354 FunFam Serine/threonine-protein kinase BIK1 22 142 - -
Mepo6g03931 354 Gene3D Phosphorylase Kinase; domain 1 30 142 - -
Mepo6g03931 354 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 143 352 - -
Mepo6g03931 354 PANTHER OS01G0588500 PROTEIN-RELATED 28 342 - -
Mepo6g03931 354 SUPERFAMILY Protein kinase-like (PK-like) 34 344 IPR011009 -
Mepo6g03931 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Mepo6g03931 354 Pfam Protein tyrosine and serine/threonine kinase 59 338 IPR001245 GO:0004672|GO:0006468
Mepo6g03931 354 Gene3D Transferase(Phosphotransferase) domain 1 143 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03931 Mepo-Chr6 51669534 51672568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03931 33 339 Glycoside Hydrolase AT3G07070 45.307 3.82e-90 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo6g03931 PK_Tyr_Ser-Thr 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03931 - - gmx:100788856 500.745