Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03922 ATGAAACTTTTGAACCCTTCCCACCCAAACCCATTTCCTCTTTCTTCTCCATCTCAGACCCAACATATGGAACAACAATCTTCACCTACAAACCTTCAAATTCATGTTGCTGTTGGTAAATCACTTCACAAAACCACCACTTTGCTTCAATGGACTTTCAACCACTTTCAAAGCACAGAAATTGTATTAATTCATGTTTATCAACCTTCTCCTTTTATACCCACTTTGTTGGGGAAAATGCCAGCATCCCAGGCTAATCCTGAAGTGGTATCAGCTTTTAGAAGAGAGGAAAGAGAACAGACTGTGAGGTTTACTAATAAGTATTTGAGCATTTGCTTTGCAGCTAAGGTAAAGGCGAGCGTTATTGTAATGGAAGCTGACAAAATCCAAAAAGGAATTGTTGATTTGGTTGTTAAACATAATATTAGGAAGCTTGTCATTGGAGCGGCATCGGAAAATTTCATGAAAGTGAAAAGGAATTCTGGGAAAGCAAATTACACTTCCAAACATGCTCCCCCGTTCTGTGAATTATTGTTTATATATAAAGGCAGACACATTTGGACAAGAGAGGCTTCTGAAACACCATGTTCTTTGTCTTCACATGCTCAGCCTGATATCACAGTCACAGAAAGCTTGAGATGTCGATCTTTTCAGTATGGTAAGAATGAACTACCCCATTTGGAACGTCTTCAACCAAATTCTGCTAGAACTACAGTATGTTCTGGAATTAGAAGCTTGGATCTGGGTGAAATCATAGAAACCGAAGCCACTAATTCATCCAAATCATCCAGTTTTAGTAGTTATTGTTCTCCGCAAAATTCTGCTGAGGTTTGTCTAGATACGTATTCAGAGGTCATGGAAGAAAAAATTAACAGTCAACTTATTGAGACCAAAAGAGAAGCTGAGGCAGCAACAGATGAGTCCTTTGCAGAACTATTGAAGTGCAGGAGGTCGGAAGTCGAAGCCAAGGAGGCCATAAGGAAGGTCAAATTATTTGAATCTGCCCATGCACATGAGATGGAGCTCAGAAAAGAGGCAGAGGATGCACTTAGAGTTACCATACTAGAACAACAAAAACTCGTAGAAGAGAGTGAAGATATTTCCAGTAATCTACAAATGACCATGAGAAATGTGGCCCTATTAGATAGTCGTGTTAAGGAAACAGCCCGTAGGCGAGATGAAGCTTCACACGAACTCTTGCTAATTCAAACTTCCATATCAACCTTGTGGCAAGAAAGGCAGCAGATCCGGAGACAGAAAATGGAAGCCCTCCGCTGGCTGGAACGGTGGAAAAGTCGTGGACAAGTCGGAGCAGCTCACTACAATGGGGTCATAGGGTTTGCAGAAGAACTTCCAGAGTTAGCAGAATTTTCATTATCAGATATTGAAAATGCTACATGTAATTTTTCCAAGAGCTTTGAAATTGCGCAAGGTGGATTTGGTTGTATATATAAGGGGGAAATGTTGGGTAGAACTGTTGCTATAAAGAAGTTCCACCAACATAATGTGCAAGGACCAGCAGAGTTTCATCGAGAGGTACAAATTCTTAGTAGTCTCCAACATCCTCATTTATTGACTTTGCTTGGTGTTTGCCCCGAAGCCTGGTCAATAGTATATGAGTACCTCCCTAACGGAACTCTTCAAAACTACCTATTCCGGAAAAGTAACATCATCCCTTTGACATGGAATATCAGAGCACGAATGATTGCCGAAATTTCCAGTGCACTGTGCTTCTTACATTCTTTTAAACCGGACGCTATTATCCATGGTGATCTGAAGCCTGAGACTATACTTCTTGATTCTTCACTTAGTTGCAAGATATGCGAATTCAGGTATAGCAGGCTTGTGACAGAGGAGTCTCTCTATAGTCCTAGTTTCCACTTGAGCACTGAGCCAAAGGGTGCTTTCACATATACAGATCCTGAGTTTCAGCGAACTGGGGTACTGACACCCAAGTCTGACATCTACTCCTTTGGACTTATTATTTTGCAACTCCTCACTGGCAGAACCCCGGTTGGATTAACAGTTCTAGTTCGCCATGCTGTTTCATGTGGAAAATTGTCTTCGATTCTTGATTCTTCAGCTGGAGAATGGCCTTTATCTGTGGCATCACGGTTGGTTGAACTGGGTTTGCAATGTTGTGCGCAAAATTGCAGAAACAAACCAGAGTTAACACCTACTCTTGTGAGAGAGTTGGAACAGTTACATGTTTCAGAAGAGAGACCTGTGCCATCTTTTTTCTTATGTCCAATCCTTCAGGAAATAATGCATGATCCTCAAATTGCAGCAGATGGGTTTACGTATGAAGGGGATGCCATACGTGAATGGTTGGAAAATGGGCATGATACTTCTCCAATGACTAATTTAAAGTTGAGTCACTTGCTTCTCACTCCCAATCACTCAATTAGACTTGCCATCCAAGACTGGCTCTGCAAATCATAA 2442 0.4128 MKLLNPSHPNPFPLSSPSQTQHMEQQSSPTNLQIHVAVGKSLHKTTTLLQWTFNHFQSTEIVLIHVYQPSPFIPTLLGKMPASQANPEVVSAFRREEREQTVRFTNKYLSICFAAKVKASVIVMEADKIQKGIVDLVVKHNIRKLVIGAASENFMKVKRNSGKANYTSKHAPPFCELLFIYKGRHIWTREASETPCSLSSHAQPDITVTESLRCRSFQYGKNELPHLERLQPNSARTTVCSGIRSLDLGEIIETEATNSSKSSSFSSYCSPQNSAEVCLDTYSEVMEEKINSQLIETKREAEAATDESFAELLKCRRSEVEAKEAIRKVKLFESAHAHEMELRKEAEDALRVTILEQQKLVEESEDISSNLQMTMRNVALLDSRVKETARRRDEASHELLLIQTSISTLWQERQQIRRQKMEALRWLERWKSRGQVGAAHYNGVIGFAEELPELAEFSLSDIENATCNFSKSFEIAQGGFGCIYKGEMLGRTVAIKKFHQHNVQGPAEFHREVQILSSLQHPHLLTLLGVCPEAWSIVYEYLPNGTLQNYLFRKSNIIPLTWNIRARMIAEISSALCFLHSFKPDAIIHGDLKPETILLDSSLSCKICEFRYSRLVTEESLYSPSFHLSTEPKGAFTYTDPEFQRTGVLTPKSDIYSFGLIILQLLTGRTPVGLTVLVRHAVSCGKLSSILDSSAGEWPLSVASRLVELGLQCCAQNCRNKPELTPTLVRELEQLHVSEERPVPSFFLCPILQEIMHDPQIAADGFTYEGDAIREWLENGHDTSPMTNLKLSHLLLTPNHSIRLAIQDWLCKS 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03922 813 ProSiteProfiles Protein kinase domain profile. 469 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03922 813 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 743 813 IPR013083 -
Mepo6g03922 813 ProSiteProfiles U-box domain profile. 742 813 IPR003613 GO:0004842|GO:0016567
Mepo6g03922 813 SUPERFAMILY RING/U-box 740 812 - -
Mepo6g03922 813 PANTHER OS02G0152300 PROTEIN 34 807 - -
Mepo6g03922 813 SMART Ubox_2 746 809 IPR003613 GO:0004842|GO:0016567
Mepo6g03922 813 SUPERFAMILY Protein kinase-like (PK-like) 453 728 IPR011009 -
Mepo6g03922 813 Gene3D Transferase(Phosphotransferase) domain 1 542 742 - -
Mepo6g03922 813 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 49 155 - -
Mepo6g03922 813 MobiDBLite consensus disorder prediction 14 29 - -
Mepo6g03922 813 MobiDBLite consensus disorder prediction 1 29 - -
Mepo6g03922 813 Coils Coil 287 307 - -
Mepo6g03922 813 Gene3D Phosphorylase Kinase; domain 1 446 541 - -
Mepo6g03922 813 Gene3D HUPs 27 159 IPR014729 -
Mepo6g03922 813 CDD STK_N 34 183 - -
Mepo6g03922 813 Pfam Protein tyrosine and serine/threonine kinase 474 725 IPR001245 GO:0004672|GO:0006468
Mepo6g03922 813 Pfam U-box domain 743 812 IPR003613 GO:0004842|GO:0016567
Mepo6g03922 813 CDD RING-Ubox_WDSUB1-like 744 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03922 Mepo-Chr6 51560338 51565535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03922 33 810 U-box Gene Family AT2G45910 36.364 4.23e-170 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mepo6g03922 PK_Tyr_Ser-Thr 1.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03922 - - gmx:100788846 1258.05