Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03917 ATGGTTTTCTCTTCTATTCCATCTTATTTAGATCCTCTCAATTGGCAGCAACAACCAAATCAACATCAGTTACTTCCACCACTATCCTCATCACAGCCACATGGTGCAGGCTCAATTATCAGGCCCGGTTCGATACCGGATCAAGCTCAAGCTCAGGCAGCTCATGAAATTCAAACTGGTCATCAGGTTCAAACTCACCAAGCTAAGTTACCACCACCTTCAGAGACAGCTCTAAAGTGTCCTCGTTGTGAATCAACCAACACAAAATTTTGTTACTACAACAACTATAACTTGTCTCAACCAAGACACTTTTGCAAGACATGTAGGCGTTATTGGACAAGAGGGGGTGCATTAAGAAATGTTCCTGTTGGTGGAGGGTGTCGTAGAAGCAAAAAGACCAAAAAGAGTAACACCTCTACTACTCCCTCAAAATCTCCAATATCAAATAGTAATGACAAAGACTATTCAACAAGTGCAATCCATTCAACTTCAACTCCTCTTGGAGAATTCTTACACCCAACTAATAGACCTAATTACATGACATCTCTTCAGAATCTGAACCGGTTCGGTGTTGGAAACATGTTTCAAATTGGTGATTATAGTTCAACTACTGGTGGAGGAGAAGGAGGAGTTGTGGATCAGTGGAGATTTCAACAGTTTCCTTTCATGAATAATGGCTTTGATTCAAGTACTTCAAATGTTTCTTTCCCATTTCAAAGTGAAATTGTTGAACCAACAACTACTTCTAGGGTTACTACTCTGATGCCCGCATCGGTTAAATCGGAACACAACGGAGGTTTTAATCTGCTTAGATCTCCAATGAATATGTCAGAGAATAACAACCATTACAATAATTCATGGACTGATTTTCATGGTCTTGCATCTTCTTCGGCTAGTCGTCTGTTATAA 909 0.4004 MVFSSIPSYLDPLNWQQQPNQHQLLPPLSSSQPHGAGSIIRPGSIPDQAQAQAAHEIQTGHQVQTHQAKLPPPSETALKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRSKKTKKSNTSTTPSKSPISNSNDKDYSTSAIHSTSTPLGEFLHPTNRPNYMTSLQNLNRFGVGNMFQIGDYSSTTGGGEGGVVDQWRFQQFPFMNNGFDSSTSNVSFPFQSEIVEPTTTSRVTTLMPASVKSEHNGGFNLLRSPMNMSENNNHYNNSWTDFHGLASSSASRLL 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03917 302 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 59 254 IPR045174 GO:0003700|GO:0006355
Mepo6g03917 302 MobiDBLite consensus disorder prediction 20 37 - -
Mepo6g03917 302 MobiDBLite consensus disorder prediction 136 172 - -
Mepo6g03917 302 ProSiteProfiles Zinc finger Dof-type profile. 78 132 IPR003851 GO:0003677|GO:0006355
Mepo6g03917 302 MobiDBLite consensus disorder prediction 59 79 - -
Mepo6g03917 302 MobiDBLite consensus disorder prediction 20 43 - -
Mepo6g03917 302 ProSitePatterns Zinc finger Dof-type signature. 80 116 IPR003851 GO:0003677|GO:0006355
Mepo6g03917 302 Pfam Dof domain, zinc finger 77 132 IPR003851 GO:0003677|GO:0006355
Mepo6g03917 302 MobiDBLite consensus disorder prediction 122 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03917 Mepo-Chr6 51515673 51516774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03917 1 134 C2C2-Dof Transcription Factor Family AT2G37590 52.027 1.42e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo6g03917 zf-Dof 1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03917 - - psat:127087162 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03917 6 51515673 51516774 Mepo2g02051 2 29860047 29861523 PCT