Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03906 ATGATAGTTTATGTAAGAAGCAACCTTTTAAGTTTAACCACCCTCATTTTTGTTGTAGGTTTGAATAGAACAGGTAAGAGTTGTAGGTTAAGATGGGTTAATTACCTTCATCCTGGTCTCAAAAGAGGAAAGATGACTCCTCATGAAGAACGCCTTGTCCTTGAGCTTCAATCCAAATGGGGAAATAGGTGGTCACGAATTGCTCGCAAGTTACCTGGACGAACGGATAATGAGATCAAGAATTATTGGAGAACTCACATGAGGAAGAAGGCTCAGGACAAAAAGAGAGGATCCATTCCATCCACAGAACACCATGCAATGAATTCACATGCTTCCAAAGAGGCGGGAGAAGAAAGTTTTTATGACACAGGAGGATCATCAACATCAACACAAGTTAAACTAGTAGGAGAAGAACATGAACAAGAAATTTCAATGGATGATATATGGAAAGATATTGATCTATCAGAAGAGAATAGTCTACAGAATGAAGAGTGCTGCAATATTAATAACATATCTTGTTTACCAAAGACTTCTTCATCATGGGAGTATAATTCCACAGACTCACTATGGGTGATGGGTGAAGAAAGTATGTTATTCCCTATGGCTCCTATGAGTGATGACCCTTATTTTTCTTGCTATGCTAATTACTAA 651 0.381 MIVYVRSNLLSLTTLIFVVGLNRTGKSCRLRWVNYLHPGLKRGKMTPHEERLVLELQSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQDKKRGSIPSTEHHAMNSHASKEAGEESFYDTGGSSTSTQVKLVGEEHEQEISMDDIWKDIDLSEENSLQNEECCNINNISCLPKTSSSWEYNSTDSLWVMGEESMLFPMAPMSDDPYFSCYANY 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03906 216 Gene3D - 7 41 - -
Mepo6g03906 216 CDD SANT 44 87 IPR001005 -
Mepo6g03906 216 ProSiteProfiles Ig-like domain profile. 166 216 IPR007110 -
Mepo6g03906 216 Gene3D - 44 117 - -
Mepo6g03906 216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 91 IPR017930 -
Mepo6g03906 216 SMART sant 41 89 IPR001005 -
Mepo6g03906 216 MobiDBLite consensus disorder prediction 94 117 - -
Mepo6g03906 216 Pfam Myb-like DNA-binding domain 42 86 IPR001005 -
Mepo6g03906 216 MobiDBLite consensus disorder prediction 89 128 - -
Mepo6g03906 216 FunFam MYB transcription factor 44 111 - -
Mepo6g03906 216 SUPERFAMILY Homeodomain-like 22 92 IPR009057 -
Mepo6g03906 216 ProSiteProfiles Myb-like domain profile. 37 87 IPR001005 -
Mepo6g03906 216 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 18 159 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03906 Mepo-Chr6 51328722 51330092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03906 19 192 MYB Transcription Factor Family AT3G46130 56.250 6.75e-64 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo6g03906 Myb_DNA-binding 3.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03906 K09422 - cit:102621723 220.32