Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03885 ATGTATGCACACTCTAATTCAAACAATATTCCATTCTCAACACCCTTTCTTCTTCCCTCTTCTTCTCCATTTATGGAACACATCCCTGATTTCACTGAGTTAGACACTCTCTCCCAGCTGAATAACTCGGAGTTGAGCAGTGGCTATAGCAGCTATGGTGGATCACCTTCACCAAGTACTCCAATCTTGATGCAGAGGAGCATTAGCAGTCATTCCCTTCAGTACAATAATGGGACTCACCATTATCCCTTGTCCGCTTTTTTTGCTGAATTGCTCGACTCAGACGATGCTCCGGTCAGGAAAGTTTGCAGTACCGGCGATTTGCAGAGGATTAACGGAATGCAACATAATCATCATCACGTGGATAGTCCATTGTCTAGTGAAAGTAGTATGATCATAGAAGGTATGAGCAGAGTTTGTCCATATAGCCCAGAAGAAAAGAAAGTGAGAATTGAAAGATACAGAATAAAGAGGAATCAGAGGAACTTTAACAAGAAAATTAAGTATGTTTGCCGAAAGACATTGGCAGATAGGAGGCCACGAATCAGGGGACGTTTTGCGAGGAATGGTGAAATTGATAAGAAACCTATAGTCGAGTGGAGCCACATTGGTGGTGGGGAGGAAGAGGATGAAGAAGATGAAAAATGGAATAATATATTTGATTCCATAGTTGCTGCAAATCTTGTTCATGATGAGTTTCAAGGAAGTTCCTCCTTTGGTCTATTATATTAG 732 0.4126 MYAHSNSNNIPFSTPFLLPSSSPFMEHIPDFTELDTLSQLNNSELSSGYSSYGGSPSPSTPILMQRSISSHSLQYNNGTHHYPLSAFFAELLDSDDAPVRKVCSTGDLQRINGMQHNHHHVDSPLSSESSMIIEGMSRVCPYSPEEKKVRIERYRIKRNQRNFNKKIKYVCRKTLADRRPRIRGRFARNGEIDKKPIVEWSHIGGGEEEDEEDEKWNNIFDSIVAANLVHDEFQGSSSFGLLY 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03885 243 ProSiteProfiles CCT domain profile. 147 189 IPR010402 GO:0005515
Mepo6g03885 243 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 58 214 IPR045281 GO:0009909
Mepo6g03885 243 Pfam CCT motif 149 189 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03885 Mepo-Chr6 51137494 51139863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03885 143 195 C2C2-CO-like Transcription Factor Family AT5G15850 45.283 2.08e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo6g03885 CCT 6.2e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03885 - - gmx:102661609 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03885 6 51137494 51139863 Mepo6g03885 6 51137494 51139863 ECH
Mepo6g03885 6 51137494 51139863 Mepo2g01967 2 28653788 28657596 PCT