Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g03876 ATGCAATGCTTGTGGATGTGTCGTAGATCGACCAAAGATGATGAAAGTGAAGATGATTATAAACATGATCAACTTTCCTTGGATGTGAAGAAGATCGAGAGCATTGATTCTAGCCATAAAGAGAAGCAAAATAAGGTTAAAGTTGATTTGAATGTGAGTGAGAAAACAGAAGATGAATTAAAAGATGGGGTTTCCACGGATGGAAAACTTGCACAAACATTTACTTTAGATGAGCTTGCAGCTGCAACTGGGAATTTTAGAGCAGATTGCTTTGTTGGTGAAGGAGGGTTTGGCAAGGTTTATAAGGGTTACCTCCAGAAAACTAATCAGTTTGTTGCAATAAAGCAACTTGACCTTAATGGCGTTCAAGGAACCAGAGAATTTGTTGTTGAAGTGTTAACACTTAGTTTGGCAGAACACCCGAATCTTGTCAAGTTATTAGGGTTTGGTGCTGAGGGAGCGCAAAGGCTTTTGGTTTACGAGTACATGCCTTTGGGATCTTTGGAGAATCATTTGCATGATCTTCCTCCCAGGATAAAACCACTGGATTGGAATACAAGAATGAGAATAGCTGCTGGTGTAGCTAAAGGTTTGGAGTATTTGCATGATGAAATGAAGCCTCCTGTCATATACCGTGACCTCAAATGCTCCAACATTTTGTTAGGCGATGATTATCATCCCAAGTTATCTGATTTTGGCTTGGCAAAAGTAGGCCCAGTGGGTGATAAGACTCATGTTTCCACAAGAGTTATGGGAACATATGGCTATTGTGCTCCAGAGTACGGAATGACAGGTCAATTGACATTCAAGTCTGACATTTATAGCTTTGGAGTTGCTCTTTTGGAGCTCATCACAGGCAGAAAGGCCTACGACGAGAGTAAACCTTCTAAAAAACAAAAAATAGTCGAATGGGCAACTCCGTTATTCAATGACCGAAAAAATTTCTCAAAGATGGTGGATCCATTGCTCAAAGGTCAATATCCAGCAAGGGGTTTGTACCACGCTCTTGCTATTGCTTCTATGTGTGTTGTAGAGGAGTCTAATAACCGGCCGGTTATAGCAGATGTGGTTAAAGCTCTAGATTTCCTTGCTTCTCAAAAATATGTACCACGAGTTCATCCAATACAAAGGTCGAGATATGGTTCCTCTTCTTCAAGAAGTAGGGCTGAAGGTCATAGACGCGTTACTAGTAATGTCTCAGAGAAAGACAGACTGGGAAATTAG 1224 0.4077 MQCLWMCRRSTKDDESEDDYKHDQLSLDVKKIESIDSSHKEKQNKVKVDLNVSEKTEDELKDGVSTDGKLAQTFTLDELAAATGNFRADCFVGEGGFGKVYKGYLQKTNQFVAIKQLDLNGVQGTREFVVEVLTLSLAEHPNLVKLLGFGAEGAQRLLVYEYMPLGSLENHLHDLPPRIKPLDWNTRMRIAAGVAKGLEYLHDEMKPPVIYRDLKCSNILLGDDYHPKLSDFGLAKVGPVGDKTHVSTRVMGTYGYCAPEYGMTGQLTFKSDIYSFGVALLELITGRKAYDESKPSKKQKIVEWATPLFNDRKNFSKMVDPLLKGQYPARGLYHALAIASMCVVEESNNRPVIADVVKALDFLASQKYVPRVHPIQRSRYGSSSSRSRAEGHRRVTSNVSEKDRLGN 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g03876 407 PANTHER OS07G0668900 PROTEIN 24 369 - -
Mepo6g03876 407 SUPERFAMILY Protein kinase-like (PK-like) 73 385 IPR011009 -
Mepo6g03876 407 MobiDBLite consensus disorder prediction 375 407 - -
Mepo6g03876 407 MobiDBLite consensus disorder prediction 386 407 - -
Mepo6g03876 407 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03876 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Mepo6g03876 407 Gene3D Phosphorylase Kinase; domain 1 46 162 - -
Mepo6g03876 407 FunFam probable serine/threonine-protein kinase RLCKVII 57 162 - -
Mepo6g03876 407 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03876 407 Pfam Protein kinase domain 91 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g03876 407 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Mepo6g03876 407 Gene3D Transferase(Phosphotransferase) domain 1 163 375 - -
Mepo6g03876 407 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g03876 Mepo-Chr6 51026233 51029117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g03876 52 365 Glycoside Hydrolase AT3G07070 59.873 2.53e-138 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mepo6g03876 Pkinase 4.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g03876 - - mtr:11419113 589.341